Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq297 147 2e-30 seq1037 134 1e-26 seq223 104 2e-17 >seq297 Length=1033366 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||||||||| || || || || ||||||||||| || ||||||||||| Sbjct 234515 TTCCACCACGGAGTCGCAAGACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAG 234456 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| || ||| || || |||||||| ||||| || || | ||||||||| || | Sbjct 234455 AAAGCGTGCGACCGTCTTCTAGTTGTTTGCCAGCAAAGATTAACCTCTGCTGATCTGGGG 234396 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| ||||| ||||| |||||| || | || || || | || | Sbjct 234395 GAATACCTTCTTTGTCTTGGATTTTAGCTTTGACATTTTCAATGGTATCAGATGGCTCAA 234336 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| ||||| || || || || || ||||| ||||| || ||||| Sbjct 234335 CCTCGAGTGTAATAGTCTTTCCAGTCAATGTTTTTACGAAGATCTGCAT 234287 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || || || || || || |||||||||||||||||||| | Sbjct 233373 CCACCACGGAGACGCAAGACCAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCAGAA 233314 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || || ||||| || ||||| || || | ||||||||| || || Sbjct 233313 AGTGTGCGACCATCTTCTAGTTGTTTTCCGGCAAAGATTAATCTCTGCTGATCTGGGGGA 233254 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| |||||| || | || || || | || || Sbjct 233253 ATACCTTCTTTGTCTTGGATTTTAGCTTTGACATTTTCAATGGTATCTGATGGCTCAACC 233194 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || ||||||||||| || || || | || || || || || |||||| Sbjct 233193 TCAAGAGTAATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCATT 233146 Score = 120 bits (132), Expect = 3e-22 Identities = 170/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||||||||| || || || || || || ||||| || ||||||||||| | Sbjct 232917 CCACCACGGAGTCGCAAGACAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAA 232858 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || || || || |||||||| ||||| | ||||||||| || || Sbjct 232857 AGTGTGCGACCATCTTCCAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGA 232798 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || || ||| || || | ||||| || | || || Sbjct 232797 ATACCTTCCTTGTCTTGGATCTTGGCTTTCACATTTTCAATGGTGTCTGAGGGCTCGACC 232738 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT--TTTGttttt 134722 || ||||| ||||| || || || | ||||| ||||| || ||||| | ||||||| Sbjct 232737 TCAAGAGTGATGGTCTTGCCTGTGAGGGTTTTTACGAAGATCTGCATAATCTGTTTTT 232680 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||||||||| || || |||||||| || ||| || || || Sbjct 233583 ACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAGTCAGAAAGTGTGCGACCATCTTCT 233524 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || ||||| || ||||| || || | ||||||||| || || || |||||||| ||||| Sbjct 233523 AGTTGTTTTCCGGCAAAGATTAATCTCTGCTGATCTGGGGGAATACCTTCTTTGTCTTGG 233464 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| |||||| || | || || || | ||| || || || ||||| ||||| Sbjct 233463 ATTTTAGCTTTGACATTTTCAATAGTATCTGAGGGTTCAACTTCCAGGGTAATTGTTTTG 233404 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| |||||||| || ||||| Sbjct 233403 CCAGTAAGAGTCTTAACGAAGATCTGCAT 233375 Score = 118 bits (130), Expect = 1e-21 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || || || || ||||||||||| || || |||||||| | || | | | || || Sbjct 234267 ACAAGATGGAGAGTGGATTCCTTCTGGATATTGTAGTCAGACAGTGTCCTTCCA-TCTTC 234209 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| || |||||||| ||||| | ||||||||| || || |||||||| || ||||| Sbjct 234208 CAGCTGCTTACCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 234149 Query 134624 AATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGTAATGGTTT 134682 |||||| |||| || | |||| ||||| || | ||| || || || ||||| |||| Sbjct 234148 AATTTTAGCCTTGA-CGTTTTCAATGGTGTCTGAGGGTTCAACTTCCAGGGTAATTGTTT 234090 Query 134683 TACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || | || |||||||| || ||||| Sbjct 234089 TGCCAGTAAGGGTCTTAACGAAGATCTGCAT 234059 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || || || || || |||||||| || ||||||||||| | Sbjct 233829 CCACCACGGAGACGCAAGACCAGATGGAGAGTTGATTCCTTCTGGATGTTGTAGTCCGAA 233770 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || |||||||| || || || ||||| | ||||||||| || || Sbjct 233769 AGAGTTCTTCCATCTTCTAGCTGTTTACCAGCGAAGATCAACCTCTGCTGATCAGGGGGA 233710 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 || |||||||| ||||| | |||| | | | || | |||| || || || | ||| || Sbjct 233709 ATACCTTCTTTGTCTTGGA-TTTTAGCCTTAACGTTTTCAATGGTATCTGAAGGTTCAAC 233651 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| |||||||| || | || |||||||| || ||||| Sbjct 233650 TTCCAAGGTAATAGTTTTACCAGTGAGGGTCTTAACGAAGATCTGCAT 233603 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || |||||||| || ||||||||||| | || | || || Sbjct 233127 ACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCC 233068 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || ||||| || || || | ||||||||| || || |||||||| || ||||| Sbjct 233067 AGCTGCTTACCTGCGAAGATTAACCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGG 233008 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| |||||| || | || || || | ||| || ||||| || ||||| || Sbjct 233007 ATTTTAGCTTTGACATTTTCAATGGTATCTGATGGTTCGACCTCGAGTGTTATGGTCTTT 232948 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| || ||||| Sbjct 232947 CCTGTCAATGTTTTTACGAAGATCTGCAT 232919 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | || || || || |||||||| ||||| ||||| || || Sbjct 234741 CCTCCACGAAGACGGAGTACAAGATGCAGAGTGGATTCTTTTTGGATGTTATAATCAGAT 234682 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || ||||||||||| || ||||| | ||||||||| || || Sbjct 234681 AGGGTACGTCCATCTTCTAGTTGTTTGCCTGCGAAGATCAACCTCTGCTGATCTGGGGGA 234622 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCAC 134665 || || || || ||||| ||||| ||||| | | ||||| | || || | ||| || Sbjct 234621 ATACCCTCCTTGTCTTGGATTTTAGCCTTGAC-GTTTTCAATGGTATCTGAGGGTTCAAC 234563 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||||||||| ||||| | || || || || || |||||| Sbjct 234562 TTCCAGGGTAATGGTTTTGCCGGTAAGGGTCTTTACAAAGATCTGCATT 234514 >seq1037 Length=250510 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| || |||| | || || || || || ||||||||||||||||||||||| | | Sbjct 84031 CCTCCCCTAAGTCTAAGTACAAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCCGAC 83972 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| || || || | ||||||||| ||||||||||| | ||||||||| || || Sbjct 83971 AA-GGTGCGACCATCTTCTAACTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGAGG 83913 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || || || || | ||||| || | ||| || Sbjct 83912 AATACCTTCCTTATCCTGGATCTTAGCCTTAACATTCTCAATGGTGTCTGATGCTTCTAC 83853 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| || | ||||| ||||| |||||||| Sbjct 83852 TTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTTACGAAGATTTGCAT 83805 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| |||||||| | || ||||| || || ||||| ||||| ||||||||||| Sbjct 84487 CCTCCCCTGAGTCGGAGTACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCTGAT 84428 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | ||||| || ||||| ||||| | ||||||||| || || Sbjct 84427 AAGGTACGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGG 84368 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || || || || | |||||| || | ||| || Sbjct 84367 ATACCTTCCTTATCCTGGATCTTAGCCTTAACATTCTCGATTGTGTCTGATGCTTCTACT 84308 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | ||||||||| || |||||||| Sbjct 84307 TCAAGGGTGATGGTCTTGCCGGTCAGAGTTTTAACAAAGATTTGCAT 84261 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCC 134545 |||||||| || | | || || || || || |||||||||||||||||||||| || | Sbjct 80652 CCTCCTCTTAGCCTGAGTACAAGATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCCGAC 80593 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| || || || | ||||||||| ||||| || || | ||||||||| || || Sbjct 80592 AA-GGTGCGACCATCTTCTAACTGTTTGCCGGCAAAGATTAACCTCTGCTGATCTGGAGG 80534 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || || || || | ||||| || | ||| || Sbjct 80533 GATACCTTCCTTATCCTGGATCTTAGCCTTAACATTCTCAATGGTGTCTGATGCTTCAAC 80474 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| || | ||||| ||||| |||||||| Sbjct 80473 TTCAAGGGTGATAGTCTTACCAGTAAGGGTTTTTACGAAGATTTGCAT 80426 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| || | | || || || || || ||||||||||||||||||||||| | | Sbjct 81542 CCTCCTCTCAGCCTGAGAACAAGATGAAGGGTAGATTCCTTTTGAATGTTGTAGTCTGAC 81483 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| || || || | |||||| || ||||| ||||| | ||||||||| || || Sbjct 81482 AA-GGTACGACCATCTTCTAACTGTTTACCGGCAAAGATCAACCTCTGCTGATCTGGAGG 81424 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || || || || | | ||| || | || || Sbjct 81423 GATACCTTCCTTATCCTGGATCTTAGCCTTAACATTTTCAATAGAGTCAGAGGGCTCTAC 81364 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| | |||||||| || |||||||| Sbjct 81363 TTCAAGGGTGATGGTCTTGCCGGTCAGTGTTTTAACAAAGATTTGCAT 81316 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| ||||| | | || || || || || ||||||||||||||||||||||| | | Sbjct 83297 CCTCCCCTGAGCCTGAGAACAAGATGAAGGGTAGATTCCTTTTGAATGTTGTAGTCTGAC 83238 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| | || || | |||||| || ||||| ||||| | ||||||||| || || Sbjct 83237 AA-GGTGCGTCCATCTTCTAACTGTTTACCGGCAAAGATCAACCTCTGCTGATCTGGAGG 83179 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 || ||||| || || || || || Sbjct 83178 GATACCTTCCTTATCCTGGATCTT 83155 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| || | | || ||||| || || ||||| ||||| ||||||||||| | | Sbjct 81314 CCTCCTCTCAGCCTGAGTACAAGGTGAAGGGTTGATTCTTTTTGGATGTTGTAGTCTGAC 81255 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| | || || | ||||| || ||||| ||||| | ||||||||| || || Sbjct 81254 AA-AGTGCGGCCATCTTCTAATTGTTTACCGGCAAAGATCAACCTCTGCTGATCTGGAGG 81196 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || || || || | ||||| || | || || Sbjct 81195 GATACCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCGATGGTGTCTGAGGGCTCTAC 81136 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || | ||||| || || || || | ||||| ||||| || ||||| || Sbjct 81135 CTCTAAGGTAATAGTCTTGCCCGTAAGGGTTTTCACGAAGATCTGCATCTT 81085 >seq223 Length=534358 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| ||||||||||||||| | || | || || ||||||||||| || || | Sbjct 233335 CCTTCTGAATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGTTTGCCAGCGAAGA 233276 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 | | |||||||||||| || || ||||| || || ||||| || || || || | Sbjct 233275 TAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCT 233216 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | || || || | || || |||||||| ||||| ||||| |||| || ||||||| Sbjct 233215 CGATGGTATCTGAAGGCTCGACCTCGAGAGTGATGGTCTTACCCGTTAGGGTCTTAACGA 233156 Query 134704 AAATTTGCATTTTGt 134718 | || ||||| |||| Sbjct 233155 AGATCTGCATCTTGT 233141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505270414172680