Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq176 82.4 8e-11 >seq176 Length=640401 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 19493 TTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTG 19552 |||||||||||||| ||||| |||||||| ||||| | || || || || || | Sbjct 537159 TTCGCCATCTACCTTGAGCCGTGGCACGCTGACGTATTTGAATTTCTTGACTTGAAGAAG 537100 Query 19553 AACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGAC 19612 ||| ||| | || || |||| || || || || |||||||||||||| || Sbjct 537099 AACACCGGTAAAGAAGAAGTGCGGGCACGAGATCTGTTTTACGCCTTGTGGATTCCCGAT 537040 Query 19613 CTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGC 19672 ||||||||||| | || || ||| ||| | | ||| || ||||| || || ||| Sbjct 537039 CTATTCATGGAAAGAGTGGAAAAGAACGGAAAGTGGAGTCTTATGTGTCCACATCAATCT 536980 Query 19673 CCTGGCCT 19680 ||||| || Sbjct 536979 CCTGGGCT 536972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548385892950960