Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq66 98.7 1e-15 >seq66 Length=1158871 Score = 98.7 bits (108), Expect = 1e-15 Identities = 200/292 (68%), Gaps = 9/292 (3%) Strand=Plus/Minus Query 32672 CTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTA-GATACTATTTTCTTCATAA 32730 || ||||| ||||| ||||||| | | |||| ||| || ||| | |||||||| Sbjct 20292 CTGGTGGTACTATTT---CTCTAAACTTCTTGAAT-TCTGTGACACTTTCTTCTTCATCC 20237 Query 32731 TGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT- 32789 | | |||||| || || | | ||| ||||||| |||||||| | ||||||||| Sbjct 20236 TACGTAAGAAAGAAAAGCAGCTAACGTTTCTGCACGTGTACCACCACTCGACCATGTTTT 20177 Query 32790 -ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAGGCATTTTTTGGAGCACA 32848 ||||| | ||||| || ||||| ||| | || | || | || || || Sbjct 20176 CACTTTGG--TGGATCGGTATTAAGTGGGTACCAAGTGGGTCTACCTTCTTACCTGCTAT 20119 Query 32849 GATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGATTAACAGCAATAGGTCC 32908 | | || || |||||||||||| | |||||| || ||||| || |||| | || || Sbjct 20118 GGTCAACTCCTTTATACATGTTCTCATGTATTCATACTACGGCCTATCAGCTGTTGGACC 20059 Query 32909 TTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATCATACAATTG 32960 | | | |||||||| ||||||||||| ||| | ||||| |||||||| Sbjct 20058 TAACATAGCTAAATATCTTTGGTGGAAAAAGTATCTTACTATGTTACAATTG 20007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603028052002160