Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq652 214 1e-50 >seq652 Length=419067 Score = 214 bits (236), Expect = 1e-50 Identities = 437/647 (68%), Gaps = 7/647 (1%) Strand=Plus/Plus Query 29885 ACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGC 29944 |||| | || |||||||||||||||||||| |||| ||||| || || |||| | Sbjct 407048 ACGTGGTTCAAGTAGACGTGAGCGTCTCCCAAAGTGTGTACAAATTCACCGGGTTTCAAG 407107 Query 29945 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 30004 ||||| |||||||| |||||||| ||||| | | ||| || |||||||| ||||| Sbjct 407108 CCGGTAACGTGAGCGATCATGTAGGTGAGTAAGGCGTACGAAGCTATGTTAAACGGTACG 407167 Query 30005 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACG 30064 || | |||||||| |||| |||||||| || |||| || || | |||||| ||| Sbjct 407168 CCTAAACCCATGTCGGCCGATCTCTGGTAAAGTTGACTTGAAAGTTTACCGTCGGCCACA 407227 Query 30065 TAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCA--TGAGGCCCAAGTCTTTGGGGT 30122 |||||||| || |||||| ||||| ||||||| | ||| || ||| |||| Sbjct 407228 TAAAACTGGACCAGACAGTGGCAGGGAGGTAGAGCCATTTTAGG--CAGATCTAACGGGT 407285 Query 30123 TCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGT 30182 |||| ||||||| || | | ||||| | || ||| | ||||| || | | Sbjct 407286 TCCAAGCGCACATTATCAATCTTCTGTCGTTCGGTTTGGTTTTGATGGATTCGATCAAAT 407345 Query 30183 TTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTC 30242 | || ||| || || ||| | || ||| || |||| || ||| || || | Sbjct 407346 TGGTCAACTGGTCGACACCCTTACCTCTGTAATCGTAGTTCATATCTACGTATTCGGCGC 407405 Query 30243 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30302 ||||||| ||||| ||||| |||||||| ||||||| || || ||||||||||| | Sbjct 407406 CGAAATGTCTCCATTGGAAACCGTACACAGGTCCCAAATCGCCTTCTTCCCTGTGAGTCA 407465 Query 30303 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30362 ||| ||| | | || || |||| ||| | |||||| || || || || | Sbjct 407466 GTCCCAAGGAGTCGAGGTACTCCCTCGAACTGTTACCCGACCAGATGTTCACGCCGTTTT 407525 Query 30363 CAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30422 || | |||||| | |||| || ||| ||| ||||| || | || || ||||| Sbjct 407526 TAGCCAACTCTTTCTCGCTTGTCGAACCTTTGATAAACCAAAGTAATTCTTCTACGACAC 407585 Query 30423 CCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTT---GAGGCCGTACC 30479 | |||||| |||||||| || || | | || |||| || || | | ||| Sbjct 407586 CGCGCCAAAACACCCTCTTAGTAGTCAATAAAGGGAACTCACCGTTTTCCAAACTCCACC 407645 Query 30480 TGGCCTGAGAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTCT 30526 ||| ||||| || || | |||| | |||| || ||||||||| Sbjct 407646 TGGTCTGAGCGCCGAATATAGACAGGGTTCCCACACCGGTCCTGTCT 407692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406210079295828