Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq652 150 1e-31 >seq652 Length=419067 Score = 150 bits (166), Expect = 1e-31 Identities = 418/646 (65%), Gaps = 5/646 (1%) Strand=Plus/Plus Query 29657 ACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGC 29716 ||||||| | |||||||||||| ||||||| ||||| ||||| || || |||| | Sbjct 407048 ACGTGGTTCAAGTAGACGTGAGCGTCTCCCAAAGTGTGTACAAATTCACCGGGTTTCAAG 407107 Query 29717 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACC 29776 ||||| |||||||| |||||||| ||||| | | ||| || |||||||| || || Sbjct 407108 CCGGTAACGTGAGCGATCATGTAGGTGAGTAAGGCGTACGAAGCTATGTTAAACGGTACG 407167 Query 29777 CCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACG 29836 || | |||||||| | || |||||||| || || | || || | |||||| ||| Sbjct 407168 CCTAAACCCATGTCGGCCGATCTCTGGTAAAGTTGACTTGAAAGTTTACCGTCGGCCACA 407227 Query 29837 TAAAACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTT 29895 |||||||| || | || ||||| ||||| || ||||| | || ||| ||||| Sbjct 407228 TAAAACTG-GACCAGACAGTGGCAGGGAGGTAGAGCCATTTTAGGCAGATCTAACGGGTT 407286 Query 29896 CCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 29955 ||| || |||| || | | ||||| | || ||| | ||||| || | || Sbjct 407287 CCAAGCGCACATTATCAATCTTCTGTCGTTCGGTTTGGTTTTGATGGATTCGATCAAATT 407346 Query 29956 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNC 30015 || ||| || || ||| | || ||| || | Sbjct 407347 GGTCAACTGGTCGACACCCTTACCTCTGTAATCGTAGTTCATATCTACGTATTCGGCGCC 407406 Query 30016 GAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 30075 |||||| ||||| ||||| |||||||| ||||||| || || ||||||||||| | Sbjct 407407 GAAATGTCTCCATTGGAAACCGTACACAGGTCCCAAATCGCCTTCTTCCCTGTGAGTCAG 407466 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| | | || || |||| ||| | |||||| || || || || | Sbjct 407467 TCCCAAGGAGTCGAGGTACTCCCTCGAACTGTTACCCGACCAGATGTTCACGCCGTTTTT 407526 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195 | | |||||| | |||| || ||| ||| ||||| || | || || ||||| | Sbjct 407527 AGCCAACTCTTTCTCGCTTGTCGAACCTTTGATAAACCAAAGTAATTCTTCTACGACACC 407586 Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTT---GAGGCCGTACCT 30252 |||||| |||||||| || || | | || |||| || || | | |||| Sbjct 407587 GCGCCAAAACACCCTCTTAGTAGTCAATAAAGGGAACTCACCGTTTTCCAAACTCCACCT 407646 Query 30253 CGCCTGAGACCCAAACATGGACAAGACTCCCGTGCCTGTCCTGTCT 30298 | ||||| || || || |||| | |||| || ||||||||| Sbjct 407647 GGTCTGAGCGCCGAATATAGACAGGGTTCCCACACCGGTCCTGTCT 407692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406062915640474