Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_031245.1 Length=221908 Score E Sequences producing significant alignments: (Bits) Value seq3464 84.2 3e-11 >seq3464 Length=263656 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 129965 CTGCTGAGTTAATCAAGCATGCATCTAATGCATTCCTAGCTACTAAAATATCATTTATGA 130024 ||||||| | || || |||| |||||||| || ||||| || || | | ||||| | Sbjct 115532 CTGCTGAAATGATTAAATATGCTTCTAATGCTTTTCTAGCAACAAAGGTTGCTTTTATCA 115473 Query 130025 ATGGTATTGCTAAGCTATGTGAATTCTACGGAGGTAATGTTGACGAGGTAGCTCGTGGGA 130084 ||| || || ||||||| | | |||| | ||||| ||||| | | Sbjct 115472 ATGAGATGGCAGGTTTATGTGAGCTATTAGGAGCAGACATTGACCTTTTAGCTAACAGTA 115413 Query 130085 TGGGAATGGATAGTCGAATCGGTAATCAATTCTTAAAAGCTGGATTAGGATTCGGAGGTT 130144 |||||||||| | |||| ||||| |||| | |||||||| |||||| ||||| | Sbjct 115412 TGGGAATGGACCATAGAATAGGTAAGGAATTTCTCAAAGCTGGTCCAGGATTTGGAGGAT 115353 Query 130145 CATGTTTCCCTAAGGATGTATTATCTTTA 130173 ||||||| ||||| ||| | | | ||||| Sbjct 115352 CATGTTTTCCTAAAGATTTGTCAGCTTTA 115324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709797807047520