Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq9819 127 3e-24 seq652 127 3e-24 >seq9819 Length=195331 Score = 127 bits (140), Expect = 3e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 97373 AATTTAGAATTGGATTGTTATAACGCCGAATTAAAATTAGCCGTTGAATATAACGGCGAA 97432 ||||||||| | |||||||||| | |||||||||||| ||||||||||| |||| Sbjct 44115 AATTTAGAAATAGATTGTTATAGTCCTAAATTAAAATTAGGAGTTGAATATAATGGCGCT 44056 Query 97433 CAACATTATAAATATAAACCtttttttCATAAAACAATAGGAGAATTTAGAGAATTAA-A 97491 || |||||||||| || |||| ||||||||||| | || || |||||| ||| || | Sbjct 44055 CAGCATTATAAATTTATACCTCATTTTCATAAAAACAAAGAAGCTTTTAGA-AATCAACA 43997 Query 97492 ATACAGAGATTTATTAAAGCAAATAATGTGTAAAGAAGCTGATATTACTTTAATAACGGT 97551 ||| |||||| |||||| || ||||||| | || | |||| ||||| || Sbjct 43996 ATATAGAGATGAATTAAAAAGAAGAATGTGTGATGATAACAACGTTACATTAATTGAAGT 43937 Query 97552 CCCATATACAATTAAAGACATA 97573 |||||||| ||||||| ||| Sbjct 43936 TCCATATACTGTTAAAGATATA 43915 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/160 (73%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 195102 GAAATACATTTACCGACCGACGAAAACAGAACAGCAGTGTGTTGTTTAGCGTCTTTAAAT 195161 |||||| |||||| || || || ||||||| || ||||||||| | ||||||||| Sbjct 141635 GAAATAATTTTACCCACAGATTCAACACGAACAGCTGTATGTTGTTTATCTTCTTTAAAT 141576 Query 195162 TTAGAAAAATACGATGAATGGAAAGATACGGATGTGAT--TGAATGCTG-CGTTAAAATG 195218 |||||| | || |||||||||||||||| ||| | | | || | || | ||||| Sbjct 141575 TTAGAATATTATGATGAATGGAAAGATAATGATCTTTTTATAAAAGATGTAATGGAAATG 141516 Query 195219 TTGAATAACGTTTTGGATGTTTTCATTGAAAAAGCCCCTC 195258 ||| |||| | ||| |||| || ||||| || |||| Sbjct 141515 TTGGATAATGCTTTAACAATTTTTATAGAAAAGGCACCTC 141476 >seq652 Length=419067 Score = 127 bits (140), Expect = 3e-24 Identities = 278/409 (68%), Gaps = 12/409 (3%) Strand=Plus/Minus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| |||||||| |||||||| |||||||||||||| || || ||| || Sbjct 407450 AAGGCGATTTGGGACCTGTGTACGGTTTCCAATGGAGACATTTCGGCGCCGAATACGTAG 407391 Query 50533 AT-TG--CGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGA 50589 || || | ||| ||||| |||| | || || || || || | |||| | ||| Sbjct 407390 ATATGAACTACG---ATTACAGAGGTAAGGGTGTCGACCAGTTG--ACCAATTTGATCGA 407336 Query 50590 --CGTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGA 50647 | | ||||| || || |||| | | | ||||| ||| ||||| || || Sbjct 407335 ATCCATCAAAACCAAACCGAACGACAGAAGATTGATAATGTGCGCTTGGAACCCGTTAGA 407276 Query 50648 TATAGATCAAACCGTTTTACCTCCGTGTCA-TGTTTTATGTCAATTTTATGCCACAGACA 50706 | | | ||| | | ||||||| || || ||| | | || ||||||| | ||| Sbjct 407275 TCTGCCTAAAATGGCTCTACCTCCCTGCCACTGTCTGGTC-CAGTTTTATGTGGCCGACG 407217 Query 50707 ATGTTTTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCA 50766 | | || ||||| ||| || ||||| || || |||||||||||||| || || | Sbjct 407216 GTAAACTTTCAAGTCAACTTTACCAGAGATCGGCCGACATGGGTTTAGGCGTACCGTTTA 407157 Query 50767 ACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGG 50826 || ||||||| ||||| ||| | || || |||||||||| | || ||||||| | Sbjct 407156 ACATAGCTTCGTACGCCTTACTCACCTACATGATCGCTCACGTTACCGGCTTGAAACCCG 407097 Query 50827 GAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCACGT 50875 | |||||| | || || || ||||||||||| | ||| | | ||||| Sbjct 407096 GTGAATTTGTACACACTTTGGGAGACGCTCACGTCTACTTGAACCACGT 407048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666906271544040