Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq223 105 6e-18 >seq223 Length=534358 Score = 105 bits (116), Expect = 6e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||||||||| ||||||||||| || || | || || ||||| ||||| ||||| | Sbjct 233335 CCTTCTGAATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGTTTGCCAGCGAAGA 233276 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | || ||||| || || | |||| || ||||||||| ||| || ||||| | Sbjct 233275 TAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCT 233216 Query 41793 ACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 | || || | ||| ||||| | || || || |||||||| || ||||| |||| Sbjct 233215 CGATGGTATCTGAAGGCTCGACCTCGAGAGTGATGGTCTTACCCGTTAGGGTCTTAACGA 233156 Query 41853 AAATCTGCATGTTATC 41868 | |||||||| || || Sbjct 233155 AGATCTGCATCTTGTC 233140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462186927290800