Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq234 253 2e-62 >seq234 Length=462357 Score = 253 bits (280), Expect = 2e-62 Identities = 498/727 (69%), Gaps = 12/727 (2%) Strand=Plus/Minus Query 16049 CCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAG 16108 |||||||| || | || | ||| || ||| |||||||||| | ||| || | | Sbjct 280950 CCCAATTCTAATAGCAAACGATCGGCAACATATTCTATATATTTGCACATACTTTCGCTG 280891 Query 16109 TTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACC 16168 ||||| || ||||| | || || | || ||||| ||||| | |||||| || ||||| Sbjct 280890 TTCATGCCAATTAAGTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACG 280831 Query 16169 GCTTCAATGATTATATCTCTTACTACACTATTTAA-CGGAGGGTTTAATAAGTGTTTAAA 16227 || || | ||||| || | | | | | |||| ||| | || || |||||||| Sbjct 280830 GCATCTGTTATTATTTC-CAAAATCCGTTCTTTACTCGGTTTTTGTATCAAATGTTTAAA 280772 Query 16228 CATTA-TACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAA 16286 ||||| ||| ||||| ||||| ||||| ||||| || | ||| | || || || | Sbjct 280771 CATTAATACC-GCAAATTCACAGTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGA 280713 Query 16287 ATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAG 16346 |||| | ||||||||||| ||| ||||| || | ||||||||| | || || ||| Sbjct 280712 ATGTTAAACCTGGCATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTGCCAC 280653 Query 16347 AAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTT--CTAtt 16404 ||||||||||||||| || || || || || | | |||||||| | | | | | Sbjct 280652 TAAAGAATATACCTTCGACGGCAGCGAAAGCTATTACACGCTCACCAAAATTAGCCGAAT 280593 Query 16405 tttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTC 16464 | | |||||| | |||||| | || || | ||||| | ||| |||| Sbjct 280592 GCGA--TGATATCCAAGCTAGAGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTC 280535 Query 16465 TATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAA 16524 || |||||||||| ||| | |||||| ||| | ||||| || || || ||||| Sbjct 280534 AATGGCATTAAATAGATATTCACGTTCTTTTTCATCCATGATATATGTTTCGATAAGTAA 280475 Query 16525 ACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGC 16584 |||||||||||| || || | ||| ||||| || || ||||||||||||||||| | ||| Sbjct 280474 ACTATACATTTCCGAGTGCACATTTTCCATGGCAATTTGAAAACCATAAAAGCAACGAGC 280415 Query 16585 TTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATC 16644 ||||| |||||| || || | |||| | ||| |||| || || ||||| || ||||| Sbjct 280414 TTCGGTTATTTGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATC 280355 Query 16645 GCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCG--TTATCTGAAAGT 16702 | || |||||||| || | | ||| |||||||| |||| | || || Sbjct 280354 GGATGCCGCAAAAAAAGCCAAAACATGTGAAATAAAATGCCGTTCGCCGTCGCTTAACCG 280295 Query 16703 TTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCA 16762 || ||| || | ||||| || | ||| ||||| || ||||||||||||| || Sbjct 280294 ATT--CCAATCGTCCATGTCTTTAGAGAGATCAACCTCCTCAGCAGTCCAAAAAGAGGCT 280237 Query 16763 ACAGCCT 16769 | |||| Sbjct 280236 TCCGCCT 280230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462499252013000