Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-23 seq145 89.7 1e-12 >seq1 Length=5869143 Score = 125 bits (138), Expect = 1e-23 Identities = 430/658 (65%), Gaps = 18/658 (3%) Strand=Plus/Plus Query 35147 AAGGAC-GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTC 35205 |||||| ||| | ||||| || || |||| || ||||| | || ||| ||||| Sbjct 1470041 AAGGACTGATCGTACTGGTGTTGGTACCTTATCTATATTTGGTGCTCAGATGCGGTTCAA 1470100 Query 35206 TCTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATT-TTCTGGAGAGGAGTTG 35264 | | ||||| | ||||| ||| | | | ||| |||| | |||||| | | ||| | Sbjct 1470101 TATGCGAGA----ATCATTCCCGTTATTAACAACAAAAAAAGTGTTCTGGCGCGCAGT-G 1470155 Query 35265 TG-GAAGAACT-CTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAA 35322 || |||||||| ||| ||||| || || |||| || || || |||| | || || Sbjct 1470156 TGTGAAGAACTACTC-TGGTTTATAAGCGGCAGCACTGATGCGAAAGTCCTACAGAACAA 1470214 Query 35323 GAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATA 35382 || || ||||||||||| | ||| | || || |||||||| || | ||||| Sbjct 1470215 AAACATTCACATCTGGAATGGTAACGCTAGTCGTGATTTTTTGGATAGATGCGGGTTCAG 1470274 Query 35383 CGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGC 35442 ||| | | ||| || || |||| || | ||||| || |||||||| |||||||| || Sbjct 1470275 TGATCGCGAAGAAGGCGACCTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGC 1470334 Query 35443 TGAATATGATACCTGTTCTTCCGATTATACTGGAA---AGGGTATTGATCAATTGGCCAA 35499 ||||| || || | |||| | ||| | |||| | ||||||||| | Sbjct 1470335 ACAATATCGCAC---TTGTCGCGATAGTTATGGTACGGAGGGAGTCGATCAATTGAAGCA 1470391 Query 35500 TATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAA 35559 ||| | |||| | | |||||| ||| || | |||||| || | | ||||| Sbjct 1470392 GATAATTGAGACAATAACTATAAATCCTACCGATCGACGTATGATTCTGTCCTCTTGGAA 1470451 Query 35560 TCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATG 35618 ||| | ||| | | ||||| | || || ||||| || | || || || |||| Sbjct 1470452 TCCAGTAGATATACCAAAAATGGCCTTACCACCCTGCCA-TTGCTTGGCCCAGTTCTATG 1470510 Query 35619 TGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCG 35678 | || ||| || |||| ||||| | |||||||| || | ||| | ||| |||| | Sbjct 1470511 TAGCCAATAATGAGCTGTCATGCCAACTTTATCAGCGCAGTGCCGATATGGGGCTGGGTG 1470570 Query 35679 TGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTC 35738 | || || ||||| ||||| || | | | || | |||| || | | || | Sbjct 1470571 TCCCATTTAATATAGCATCCTATGCATTATTAACGTGTATGATTGCACATTTAACTGGCC 1470630 Query 35739 TAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACAT 35796 | ||||| || || ||| ||| |||| || || | ||||||||||| || || || Sbjct 1470631 TTAAACCAGGCGATTTTGTCCACACTACCGGCGATACGCACATTTATAAAACGCATAT 1470688 Score = 122 bits (134), Expect = 2e-22 Identities = 429/658 (65%), Gaps = 18/658 (3%) Strand=Plus/Plus Query 35147 AAGGAC-GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTC 35205 |||||| ||| | ||||| || || |||| || ||||| | || ||| ||||| Sbjct 1455271 AAGGACTGATCGTACTGGTGTTGGTACCTTATCTATATTTGGTGCTCAGATGCGGTTCAA 1455330 Query 35206 TCTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATT-TTCTGGAGAGGAGTTG 35264 | | ||||| | ||||| ||| | | | ||| |||| | |||||| | | ||| | Sbjct 1455331 TATGCGAGA----ATCATTCCCGTTATTAACAACAAAAAAAGTGTTCTGGCGCGCAGT-G 1455385 Query 35265 TG-GAAGAACT-CTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAA 35322 || |||||||| ||| ||||| || || |||| || || || |||| | || || Sbjct 1455386 TGTGAAGAACTACTC-TGGTTTATAAGCGGCAGCACTGATGCGAAAGTCCTACAGAACAA 1455444 Query 35323 GAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATA 35382 || || ||||||||||| | ||| | || || |||||||| | | ||||| Sbjct 1455445 AAACATTCACATCTGGAATGGTAACGCTAGTCGTGATTTTTTGGATAAATGCGGGTTCAG 1455504 Query 35383 CGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGC 35442 ||| | | ||| || || |||| || | ||||| || |||||||| |||||||| || Sbjct 1455505 TGATCGCGAAGAAGGCGACCTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGC 1455564 Query 35443 TGAATATGATACCTGTTCTTCCGATTATACTGGAA---AGGGTATTGATCAATTGGCCAA 35499 ||||| || || | |||| | ||| | |||| | ||||||||| | Sbjct 1455565 ACAATATCGCAC---TTGTCGCGATAGTTATGGTACGGAGGGAGTCGATCAATTGAAGCA 1455621 Query 35500 TATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAA 35559 ||| | |||| | | |||||| ||| || | |||||| || | | ||||| Sbjct 1455622 GATAATTGAGACAATAACTATAAATCCTACCGATCGACGTATGATTCTGTCCTCTTGGAA 1455681 Query 35560 TCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATG 35618 ||| | ||| | | ||||| | || || ||||| || | || || || |||| Sbjct 1455682 TCCAGTAGATATACCAAAAATGGCCTTACCACCCTGCCA-TTGCTTGGCCCAGTTCTATG 1455740 Query 35619 TGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCG 35678 | || ||| || |||| ||||| | |||||||| || | ||| | ||| |||| | Sbjct 1455741 TAGCCAATAATGAGCTGTCATGCCAACTTTATCAGCGCAGTGCCGATATGGGGCTGGGTG 1455800 Query 35679 TGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTC 35738 | || || ||||| ||||| || | | | || | |||| || | | || | Sbjct 1455801 TCCCATTTAATATAGCATCCTATGCATTATTAACGTGTATGATTGCACATTTAACCGGCC 1455860 Query 35739 TAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACAT 35796 | ||||| || || ||| ||| |||| || || | ||||||||||| || || || Sbjct 1455861 TTAAACCAGGCGATTTTGTCCACACTACCGGCGATACGCACATTTATAAAACGCATAT 1455918 Score = 122 bits (134), Expect = 2e-22 Identities = 429/658 (65%), Gaps = 18/658 (3%) Strand=Plus/Plus Query 35147 AAGGAC-GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTC 35205 |||||| ||| | ||||| || || |||| || ||||| | || ||| ||||| Sbjct 1459809 AAGGACTGATCGTACTGGTGTTGGTACCTTATCTATATTTGGTGCTCAGATGCGGTTCAA 1459868 Query 35206 TCTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATT-TTCTGGAGAGGAGTTG 35264 | | ||||| | ||||| ||| | | | ||| |||| | |||||| | | ||| | Sbjct 1459869 TATGCGAGA----ATCATTCCCGTTATTAACAACAAAAAAAGTGTTCTGGCGCGCAGT-G 1459923 Query 35265 TG-GAAGAACT-CTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAA 35322 || |||||||| ||| ||||| || || |||| || || || |||| | || || Sbjct 1459924 TGTGAAGAACTACTC-TGGTTTATAAGCGGCAGCACTGATGCGAAAGTCCTACAGAACAA 1459982 Query 35323 GAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATA 35382 || || ||||||||||| | ||| | || || |||||||| | | ||||| Sbjct 1459983 AAACATTCACATCTGGAATGGTAACGCTAGTCGTGATTTTTTGGATAAATGCGGGTTCAG 1460042 Query 35383 CGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGC 35442 ||| | | ||| || || |||| || | ||||| || |||||||| |||||||| || Sbjct 1460043 TGATCGCGAAGAAGGCGACCTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGC 1460102 Query 35443 TGAATATGATACCTGTTCTTCCGATTATACTGGAA---AGGGTATTGATCAATTGGCCAA 35499 ||||| || || | |||| | ||| | |||| | ||||||||| | Sbjct 1460103 ACAATATCGCAC---TTGTCGCGATAGTTATGGTACGGAGGGAGTCGATCAATTGAAGCA 1460159 Query 35500 TATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAA 35559 ||| | |||| | | |||||| ||| || | |||||| || | | ||||| Sbjct 1460160 GATAATTGAGACAATAACTATAAATCCTACCGATCGACGTATGATTCTGTCCTCTTGGAA 1460219 Query 35560 TCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATG 35618 ||| | ||| | | ||||| | || || ||||| || | || || || |||| Sbjct 1460220 TCCAGTAGATATACCAAAAATGGCCTTACCACCCTGCCA-TTGCTTGGCCCAGTTCTATG 1460278 Query 35619 TGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCG 35678 | || ||| || |||| ||||| | |||||||| || | ||| | ||| |||| | Sbjct 1460279 TAGCCAATAATGAGCTGTCATGCCAACTTTATCAGCGCAGTGCCGATATGGGGCTGGGTG 1460338 Query 35679 TGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTC 35738 | || || ||||| ||||| || | | | || | |||| || | | || | Sbjct 1460339 TCCCATTTAATATAGCATCCTATGCATTATTAACGTGTATGATTGCACATTTAACCGGCC 1460398 Query 35739 TAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACAT 35796 | ||||| || || ||| ||| |||| || || | ||||||||||| || || || Sbjct 1460399 TTAAACCAGGCGATTTTGTCCACACTACCGGCGATACGCACATTTATAAAACGCATAT 1460456 >seq145 Length=640502 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 94921 GTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGAT 94980 || ||||||||||| ||||| || ||| ||||||||||| ||| |||||||| | | | Sbjct 132971 GTTGGGGAAGCATGAGTAAAGTAACGCCCCGACATGAGATTATAAGTTTCAATAGCCGCT 133030 Query 94981 TTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCA 95040 | ||||| ||||||||||| | ||| |||||||| | ||| | || || ||||| Sbjct 133031 TCAATGTCATCGCCGTGAATGCCAATAGCGACACGCATTAACATATGTTGTGGTCGCTCC 133090 Query 95041 AC 95042 || Sbjct 133091 AC 133092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989556042705775