Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq135 140 8e-29 >seq135 Length=742707 Score = 140 bits (154), Expect = 8e-29 Identities = 236/342 (69%), Gaps = 0/342 (0%) Strand=Plus/Minus Query 21569 ACCAAGCATTTGCATGGTTCCACCAACGCCTACGATAACTTCGGTAGTGAACCTATCCTG 21628 ||||||||||||||| | || || ||||| |||| ||| ||| | | |||| || Sbjct 464722 ACCAAGCATTTGCATAGAACCGTTAATACCTACAATAATTTCTGTAATATATTTATCTTG 464663 Query 21629 TCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCC 21688 ||| ||||| || |||||||||||||| | | | ||||| | ||| || | ||| || Sbjct 464662 TCCACTTTGGTCTTGCCATTTTCTTGTTTGTAGACTTCCTTCGACATACACTTGAGAACC 464603 Query 21689 TTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGCCA 21748 |||| | |||||| | || ||||| || ||||| || | || || | |||||| Sbjct 464602 TTTTTTTAAATATTCTCCTGCTATTTCAGCAAGTTTTCCAAAAAAAACTACTCTGTGCCA 464543 Query 21749 CTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAAC 21808 || || | || || ||||| || | ||||||||||| | ||| || ||||||| Sbjct 464542 TTCAGTTTTTTCTTTCATTTCTCCGGTATTTTTATCACGCCAATTTTCAGATGTAGCAAG 464483 Query 21809 TGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCAAG 21868 ||||| |||| || || |||| ||| ||| | || ||||||| || || | Sbjct 464482 TGTAATATTTGTAACAGCGTTTCCATTAGGTATATAACGTATATCTGGATTTTGTCCTAA 464423 Query 21869 GCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 21910 | ||||| | || || ||||||| |||||| || | ||| Sbjct 464422 ATGCCCAATTAAAATTACTTTATTTATGCCTCTACTAGTCAT 464381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124812731771050