Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq63 96.9 2e-15 >seq63 Length=1090061 Score = 96.9 bits (106), Expect = 2e-15 Identities = 182/265 (69%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || ||| || | ||||| ||||| || || || ||||| | || || ||||| || Sbjct 885083 GGCGTTCATATTGTCATGGCAGACGGCGGATTTTCAGTTGAAAGACAGGAGAATATTCAG 885024 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| || || ||| || | || | ||||| |||||| | | |||| || | || Sbjct 885023 GAAATTTTGTCAAAACAGCTCTACCTATGTCAGTGTTTATTGGGCTTGAAAATATTGAGA 884964 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || |||| ||| ||||||||| ||||| ||||| ||||||| | ||| | Sbjct 884963 CCAAAAGGACATTTTGTGTGCAAATTTTTTGATATTTTTACCGCTTTTAGCGTCGGTCTT 884904 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACA-TTCATCGCG 4113 | ||||||||||| | | ||| | || | ||| |||| ||| | || | || Sbjct 884903 ATATATTTGATGTACAATTGCTTTGAGAAAATATCAATTATCAAGCCAAACAGCAGC-CG 884845 Query 4114 ACCGGCCAATTCTGAAAGATATTTG 4138 || |||||||| |||||||||||| Sbjct 884844 TCCCGCCAATTCGGAAAGATATTTG 884820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276546168054115