Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq181 158 2e-34 >seq181 Length=544765 Score = 158 bits (174), Expect = 2e-34 Identities = 195/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||| |||||||| | | | || ||||| || ||||| || || || || |||||| Sbjct 465662 GCTAAACGTCATCGTAAAGTGTTGCGTGATAATATTCAAGGTATAACAAAACCGGCTATC 465721 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | ||| ||||||| ||||| || || || ||| ||||||| ||| | ||||| || | Sbjct 465722 AGGCGTTTGGCTCGCCGTGGCGGTGTGAAACGTATCTCTGGCTTGATTTATGAGGAAACC 465781 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||||| ||| | ||| | | | ||||| | ||||||| || ||||| ||| Sbjct 465782 CGTGGTGTTTTAAAGGTTTTCTTAGAAAATGTTATTCGTGATGCTGTCACATATACAGAG 465841 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||||||| || || || || || | | |||| |||| ||||| ||||| | |||||| Sbjct 465842 CACGCTAAGCGAAAAACAGTTACAGCAACGGATGTCGTTTATGCTTTGAAGAGACAAGGC 465901 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | |||||||||| ||||| Sbjct 465902 CGCACTTTATATGGTTTTGCCTGTTAA 465928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073183953065