Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq135 105 2e-18 >seq135 Length=742707 Score = 105 bits (116), Expect = 2e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 32902 ACCAAGCATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTCTG 32961 ||||||||||||||| | || ||| || || || | ||| ||| | | || || Sbjct 464722 ACCAAGCATTTGCATAGAACCGTTAATACCTACAATAATTTCTGTAATATATTTATCTTG 464663 Query 32962 TCCACTTTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCC 33021 |||||||||||| |||||||||||||| | | | ||||| | ||| || | ||| || Sbjct 464662 TCCACTTTGGTCTTGCCATTTTCTTGTTTGTAGACTTCCTTCGACATACACTTGAGAACC 464603 Query 33022 TTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCA 33081 |||| | ||| || | || ||||| || ||||| || | || || | |||||| Sbjct 464602 TTTTTTTAAATATTCTCCTGCTATTTCAGCAAGTTTTCCAAAAAAAACTACTCTGTGCCA 464543 Query 33082 CTCCGTCTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTAT 33141 || || | || || || || ||||||||||| ||||| | ||| || ||||| | Sbjct 464542 TTCAGTTTTTTCTTTCATTTCTCCGGTATTTTTATCACGCCAATTTTCAGATGTAGCAAG 464483 Query 33142 TGT 33144 ||| Sbjct 464482 TGT 464480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149954473433020