Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq54 113 5e-20 seq135 96.9 4e-15 >seq54 Length=1154455 Score = 113 bits (124), Expect = 5e-20 Identities = 202/295 (68%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||| ||| ||||| ||| || |||| | | || | |||||||||| | Sbjct 822060 CCATGAGTTAGATGCCCACCACAACTCAGTGACAATCCAAGTATCGTATCGCCTGGAGTA 822119 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 |||| | | | || ||||| |||||||| ||||| || || |||||||| ||||| Sbjct 822120 AGCAGTGAAGCAAATACTGCTTGATTTGCCTGAGAACCAGAGTGAGGTTGAACATTTGCA 822179 Query 7046 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCT 7105 || || || ||||| | | | || || || || | || | | || | Sbjct 822180 AATTTAACACCGAACAGCTTACAAAGTCTTTCTATAGCTAGACTTTCAACTTTGTCCACA 822239 Query 7106 TTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAA 7165 | ||||||| | |||||||| |||||||||||| || || |||||||| || || | | Sbjct 822240 TGCTCACAACCACAGTAATACCTTTTGCCTGGATAGCCTTCTGCATACTTATTAGTCAGA 822299 Query 7166 ATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 | ||| || ||||||| ||| || | | || ||||||| |||||||||| Sbjct 822300 AAAGAGCCCTGCGCTTCCATCACTGCTTTACTTGCAAAGTTTTCTGATGCAATCA 822354 >seq135 Length=742707 Score = 96.9 bits (106), Expect = 4e-15 Identities = 197/293 (67%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 |||||||||||||| || || | | | ||| ||||||||| ||| ||||| | Sbjct 465799 CCATGTGTTAAATGCCCTCCATGTTTTAGATCCATTCCCAATACTGTATCTCCTGGCTTT 465858 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 | || || |||||||| ||| || || || || ||||| |||||||| ||||| Sbjct 465859 AATAAAGCGGAATAAACAGCAAAGTTAGCTTGCGATCCTGAATGTGGTTGAACATTTGCA 465918 Query 7046 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCT 7105 ||| | |||| | |||||| | |||||||| ||| || || || || Sbjct 465919 TAATCTACATTAAATAAAGATTTAGCTCTTGAAATTGCCAAGTTTTCAATTTCGTCTATA 465978 Query 7106 TTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAA 7165 | | |||||| || ||||| | ||| |||||| || || || |||||||| || || Sbjct 465979 TATGAACAACCTCCATAATATCTTTTTTTTGGATAACCTTCGGCGTACTTGTTAGTTAAT 466038 Query 7166 ATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAAT 7218 | || ||||| ||||| || | | | ||||| ||||| || ||||| Sbjct 466039 AGTGATCCTTGAAGATTCATGACGTACTTGCTAACATAATTTTCAGAGGCAAT 466091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553338348191400