Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq192 114 1e-20 seq15 104 2e-17 seq19 98.7 9e-16 >seq192 Length=539225 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 |||| ||||| | ||||||||||| |||| || || | || || | || ||||| Sbjct 278197 ACAATATGCAGATTTTTGTAAAAACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAAC 278256 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 || ||||| ||||| | || ||| |||||| |||||||| || || || |||| Sbjct 278257 CCTCGGACACTATCGAAAATGTAAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCCG 278316 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 | || || || |||||| || ||| |||||| | ||||||| | | | ||||| Sbjct 278317 ACCAGCAACGATTGATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTGTCCGATT 278376 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||| |||||||||||||| || | ||| | ||||| | ||| |||| ||| Sbjct 278377 ATAATATTCAAAAAGAATCCACCTTACATCTTGTGTTGCGTTTGCGAGGTGGA 278429 >seq15 Length=3179940 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23972 TACTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTAC 24031 || ||||||| | ||||||||| | || || ||||| | ||||| ||| | ||||| Sbjct 2518844 TAATTTTTAGAATATAAAAATGCAAATTTTCGTTAAAACTCTTACTGGCAAAACTATTAC 2518903 Query 24032 CATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGA 24091 | ||||| ||| | |||||| || || | ||||| || ||| || ||||| Sbjct 2518904 TTTGGAAGTTGAGCCTTCCGACACTATTGAAAATGTCAAGGCCAAAATTCAGGATAAAGA 2518963 Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151 |||||| ||||| |||||||| | |||||| || ||||| ||| | ||||||| | Sbjct 2518964 AGGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGCAAACAATTGGAAGATG-GAC 2519022 Query 24152 AAACGTCA-GCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||| | ||| |||||||| ||||| || || ||| | || || || Sbjct 2519023 GCACGTTATCCGACTATAACATACAAAAGGAGTCGACATTGCACTTGGT 2519071 >seq19 Length=2240402 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | ||||| |||||||||||||| ||| | ||||| | ||||| || || Sbjct 931746 AAAATGCAAATCTTTGTGAAAACATTAACTGGCAAAACTATTACTTTGGAAGTTGA-ACC 931804 Query 24048 AAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | | || || ||||| | || ||| || ||| || || ||||| || || || || Sbjct 931805 ATCGGATACTATCGAAAATGTTAAAGCTAAAATTCAAGATAAGGAAGGTATTCCCCCAGA 931864 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| || | |||||| | ||||||||| | ||||| | | | | | |||||| Sbjct 931865 TCAGCAACGTTTGATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACCTTGTCCGATTA 931924 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || || || ||| | ||||| || Sbjct 931925 CAACATTCAGAAGGAGTCGACATTGCATTTGGT 931957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429924446141775