Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq15 105 5e-18 seq19 98.7 8e-16 >seq15 Length=3179940 Score = 105 bits (116), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| |||| || ||||||||||||||||| ||||||| | || |||||| Sbjct 2519074 AGTACCAAGTGCAATGTCGACTCCTTTTGTATGTTATAGTCGGATAACGT----GCGTCC 2519019 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 |||||||||||||| || |||| | || ||||| || ||| | ||| ||||| Sbjct 2519018 ATCTTCCAATTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTT 2518959 Query 16840 GTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 || ||||| ||| || | | | ||||||| ||||| ||||| || || Sbjct 2518958 ATCCTGAATTTTGGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAAGTAAT 2518899 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 ||||| || || || ||||| || ||||| |||||||| Sbjct 2518898 AGTTTTGCCAGTAAGAGTTTTAACGAAAATTTGCATTTT 2518860 >seq19 Length=2240402 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || |||||||| |||| || ||| |||| Sbjct 933567 AGGACCAAATGCAATGTCGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGTCCGTCT 933508 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||| ||||| ||| |||| | || || || || || | || || ||||| Sbjct 933507 TCCAATTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCT 933448 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||| || | | | ||||||| ||||| ||| | ||||||||| Sbjct 933447 TGAATCTTGGCCTTGACGTTTTCAATAGTGTCGGAAGGCTCGACTTCTAAGGTGATGGTC 933388 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||| |||||||||||||| ||||| Sbjct 933387 TTGCCAGTCAATGTTTTGACAAAAATTTGCAT 933356 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || || ||||| |||| || ||| |||| Sbjct 933795 AGGACCAAATGCAATGTCGACTCCTTCTGAATATTGTAATCGGACAAGGTGCGTCCGTCT 933736 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||||||| || || ||| |||| | ||||| || || || | || || ||||| Sbjct 933735 TCCAATTGCTTACCGGCAAAAATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCC 933676 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| ||| || | | | |||||| ||||| ||| | ||||||||| Sbjct 933675 TGAATTTTAGCCTTGACGTTTTCAATGGTGTCGGAAGGCTCGACTTCTAGGGTGATGGTC 933616 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||| |||||||||||||| ||||| Sbjct 933615 TTGCCAGTCAATGTTTTGACAAAAATTTGCAT 933584 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 16743 ACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCAT 16802 ||||||| || |||||||| |||| || || |||| |||||||| ||||| ||| Sbjct 932169 ACTCCTTCTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCCAATTGCTTGCCAGCAA 932110 Query 16803 AAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCT 16862 |||| | || || || || || | || || ||||| ||| | ||| || | Sbjct 932109 AAATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATCTTGGCCTTGACGT 932050 Query 16863 GGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGA 16922 | | ||||||| ||||| ||| | ||||||||| || || |||| ||||||| Sbjct 932049 TTTCAATAGTGTCGGAAGGCTCGACTTCTAAGGTGATGGTCTTGCCAGTCAATGTTTTGA 931990 Query 16923 CAAAAATCTGCAT 16935 ||||||| ||||| Sbjct 931989 CAAAAATTTGCAT 931977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405077113892950