Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=5869143 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 20180 ATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGA 20239 ||||||||||| || ||||| | ||| || ||||| | ||| || || ||| |||| Sbjct 1470688 ATATGCGTTTTATAAATGTGCGTATCGCCGGTAGTGTGGACAAAATCGCCTGGTTTAAGG 1470629 Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 ||||| | ||| |||| |||| | ||||| | | |||| || || ||||| || || Sbjct 1470628 CCAGTTAAATGTGCAATCATACACGTTAATAATGCATAGGATGCTATATTAAATGGGACA 1470569 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| ||||| || | | |||||| || || || || |||||| | |||||| Sbjct 1470568 CCCAGCCCCATATCGGCACTGCGCTGATAAAGTTGGCATGACAGCTCATTATTGGCTACA 1470509 Query 20360 TAAAATTG 20367 || || || Sbjct 1470508 TAGAACTG 1470501 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 20180 ATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGA 20239 ||||||||||| || ||||| | ||| || ||||| | ||| || || ||| |||| Sbjct 1455918 ATATGCGTTTTATAAATGTGCGTATCGCCGGTAGTGTGGACAAAATCGCCTGGTTTAAGG 1455859 Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || || | ||| |||| |||| | ||||| | | |||| || || ||||| || || Sbjct 1455858 CCGGTTAAATGTGCAATCATACACGTTAATAATGCATAGGATGCTATATTAAATGGGACA 1455799 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| ||||| || | | |||||| || || || || |||||| | |||||| Sbjct 1455798 CCCAGCCCCATATCGGCACTGCGCTGATAAAGTTGGCATGACAGCTCATTATTGGCTACA 1455739 Query 20360 TAAAATTG 20367 || || || Sbjct 1455738 TAGAACTG 1455731 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 20180 ATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGA 20239 ||||||||||| || ||||| | ||| || ||||| | ||| || || ||| |||| Sbjct 1460456 ATATGCGTTTTATAAATGTGCGTATCGCCGGTAGTGTGGACAAAATCGCCTGGTTTAAGG 1460397 Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || || | ||| |||| |||| | ||||| | | |||| || || ||||| || || Sbjct 1460396 CCGGTTAAATGTGCAATCATACACGTTAATAATGCATAGGATGCTATATTAAATGGGACA 1460337 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| ||||| || | | |||||| || || || || |||||| | |||||| Sbjct 1460336 CCCAGCCCCATATCGGCACTGCGCTGATAAAGTTGGCATGACAGCTCATTATTGGCTACA 1460277 Query 20360 TAAAATTG 20367 || || || Sbjct 1460276 TAGAACTG 1460269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441360634662200