Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq135 105 6e-18 >seq135 Length=742707 Score = 105 bits (116), Expect = 6e-18 Identities = 327/493 (66%), Gaps = 16/493 (3%) Strand=Plus/Plus Query 132735 ACTTGAAGGATTTCTGAACATAGATTGCTCATAATGATTTTGCCATCAATAGGATTGGCT 132794 ||||| || ||||| ||||||| ||| ||||| | || | ||| ||||||||| | Sbjct 586941 ACTTGCAGAATTTCAGAACATAAATTACTCATGTTAATATGTCCAGAAATAGGATTAGTA 587000 Query 132795 TTATTTACAGTACTAACATTCATAATATATGGGTAACCTGACTCTTGTTGTAAA-CGGCT 132853 ||||||||| || |||||||||||| || || || || ||| | | ||| Sbjct 587001 CGGTTTACAGTATCTTCAAACATAATATATGGATACCCAGATTCAAATTGAATCTCAGCT 587060 Query 132854 AATTTCTTCTTCCAAATCTCGTGCATTCATTACCTTACTTCTGATA--TTTGGGTTCTGA 132911 ||||| || |||| |||||||| || | | || | || ||| || | | Sbjct 587061 AATTT-TTGAAAAAAATTACGTGCATTAATAGCAGTTTTTTTAATTCGTTTATCTTTT-A 587118 Query 132912 ATCATGTTATTGTATTCTGAATCAATGTCTACAAATGAGAACGGTACACCGTATTCTTTA 132971 || | |||| || | | ||| ||| ||| || ||| || || |||| Sbjct 587119 ATAAA-TTATGATAAAGTTCACTAATAACTAATTCTGAAAATGGTTGACGATAAACTTTT 587177 Query 132972 GCAACATCATATGGAGAAAATAAGTGAATTACATCCCCAGACTCAGCTAGCTCAT--AAA 133029 ||| ||| |||||||||||||| ||| ||| | || | ||| || ||| Sbjct 587178 TCAATATCGTATGGAGAAAATAAACACATT---TCCTTATTTTCTTTT-GCTAATTGAAA 587233 Query 133030 ATT--TATCGGGAACAACTACTCCCAAAGAAAGTGTTTTGATT-TGCTTTGCGGATTCTG 133086 | | |||| |||| || || || ||||| | ||||| ||| | ||| || | | Sbjct 587234 AGTAATATCAGGAATAATAACACCTAAAGATAAAGTTTTTATTCTAATTTTTTCAT-CGG 587292 Query 133087 CATTTTCTTTTCTAGTTGATAAAAAGTCCATAATATCCGCATGGAAAACATTTAGATAGA 133146 ||||||||||| |||| |||||| | | |||||| | ||| | ||| | ||| | Sbjct 587293 CATTTTCTTTTTTAGTGTCTAAAAATTTTAAAATATCAGGATGATGAGCATGCAAATATA 587352 Query 133147 CTGCGCCTGCACCTTGTCTTTGCCCTAATTGATTTGCGTACCGGAAACCATCTTCTAGCA 133206 | || || || ||||||| ||||||||||||||||| |||| |||||||||||| Sbjct 587353 CAGCTCCAGCTCCTTGTCGAGCACCTAATTGATTTGCGTAAGAGAAAGCATCTTCTAGCA 587412 Query 133207 TTTTCATAACAGG 133219 ||||||| || || Sbjct 587413 TTTTCATGACTGG 587425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454489872777600