Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq135 136 1e-27 >seq135 Length=742707 Score = 136 bits (150), Expect = 1e-27 Identities = 238/343 (69%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 27565 CCAAGCATTTGCATCACACCATTAATTCCAACATTAATCTCAGTGGTGTAGCGGTCTTGC 27624 |||||||||||||| ||| ||||| || ||| |||| || || | || ||||| Sbjct 464721 CCAAGCATTTGCATAGAACCGTTAATACCTACAATAATTTCTGTAATATATTTATCTTGT 464662 Query 27625 CCTGTCTGGTCTTGCCACTTTCTGGTTCTCAGCATTCCCTCGAAATAAACCTGATCACCT 27684 || | ||||||||||| ||||| ||| || |||| |||| ||| || ||| |||| Sbjct 464661 CCACTTTGGTCTTGCCATTTTCTTGTTTGTAGACTTCCTTCGACATACACTTGAGAACCT 464602 Query 27685 TTTTTCACATACTGCCCTACGACTTCAGCAAGTTTCCCAACTACGGCAACACGATGCCAT 27744 ||||| | ||| | ||| | | |||||||||||| |||| | | || | |||||| Sbjct 464601 TTTTTTAAATATTCTCCTGCTATTTCAGCAAGTTTTCCAAAAAAAACTACTCTGTGCCAT 464542 Query 27745 TCAGTCTGCTCCTTTTGTTCGCCAGTCTGTTTATCTCGCCACTGCTCTGATGTAGCGACT 27804 ||||| | || || ||| || || | |||||| ||||| | || |||||||| | | Sbjct 464541 TCAGTTTTTTCTTTCATTTCTCCGGTATTTTTATCACGCCAATTTTCAGATGTAGCAAGT 464482 Query 27805 GTCAGGTTAGCGAACGCCG--TCCCTGATGGTGAATAACGAACCTCCGGGTCTTGCCCGA 27862 || | || | ||| || ||| | | ||| |||||| | || || | ||| || | Sbjct 464481 GTAATATTTG-TAACAGCGTTTCCATTA-GGTATATAACGTATATCTGGATTTTGTCCTA 464424 Query 27863 CCCGGCCTAAGATGATCACCTTATTTACGCCTCTACTAGCCAT 27905 | || | | || || ||||||| ||||||||||| ||| Sbjct 464423 AATGCCCAATTAAAATTACTTTATTTATGCCTCTACTAGTCAT 464381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137525998873380