Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 2e-13 >seq54 Length=1154455 Score = 91.5 bits (100), Expect = 2e-13 Identities = 249/377 (66%), Gaps = 12/377 (3%) Strand=Plus/Minus Query 9186 ATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTC 9245 |||| || ||||| ||||| || | ||| || || ||| | || ||| || || Sbjct 77017 ATCTGTCGGTCAAAACGACCAGGTCTAAGCAGTGCTGGATCTAAGACATCCGGACGGTTA 76958 Query 9246 GTCGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAA 9302 ||||| || || | | | |||| |||||| ||||| ||||||||||| || Sbjct 76957 GTCGCAGCAATTATTATTACACCT---TCATTAGACTCAAAGCCATCCATCTCAACTAAT 76901 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG---CGT 9359 | || || | |||||||| | ||||||||| || | | |||| | || || || Sbjct 76900 AACTGATTTAATGTTTGTTCTCTTTCATCATT-GCCGCC--ACCAAGACCAATGCCACGA 76844 Query 9360 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 || | ||||| ||||| || ||||| || || | ||||| || ||||| | | Sbjct 76843 TGTCTACCCACCGCATCTATTTCATCTATAAAAATTATACAAGGAGCATTTTTCTTGCCT 76784 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 ||||| | ||| ||||| | | || || ||||| |||||||| || ||||| | Sbjct 76783 TGATCAAACATATCACGAACACGACTTGCACCAACACCCACAAACATTTCAACAAAATCA 76724 Query 9480 GCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | ||| | ||| || ||||||| ||| || ||||| || || || || | | Sbjct 76723 GATCCAGAAATACTAAAGAATGGCACATTAGCTTCTCCTGCAATTGCACGAGCAAGTAAA 76664 Query 9540 GTCTTACCCGTACCTGG 9556 || ||||| || || || Sbjct 76663 GTTTTACCAGTTCCAGG 76647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589964538654200