Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq54 89.7 6e-13 seq135 82.4 9e-11 >seq54 Length=1154455 Score = 89.7 bits (98), Expect = 6e-13 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 140960 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCTAC 141019 ||||||||| ||||||||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 759684 GTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTCGAATCCTAC 759743 Query 141020 CTGG 141023 | || Sbjct 759744 CGGG 759747 >seq135 Length=742707 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 129310 GGGGTTATAGCTCAACTGGTAGAGCGCCTGCTTTGCACGCAGGAGGTTTGGGGTTCGAGT 129369 |||| |||||||||| ||||||||| ||||||||||||||| ||||| | ||||| | | Sbjct 562490 GGGGCTATAGCTCAATTGGTAGAGCATCTGCTTTGCACGCAGAAGGTTGGCGGTTCAATT 562431 Query 129370 CCCCATAACTCCATTCTAAATACTTAGAAA 129399 || | || ||||| |||| | ||| ||| Sbjct 562430 CCGCCTAGCTCCAAAATAAAAAATTAAAAA 562401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610379975938200