Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq234 268 1e-66 seq624 98.7 1e-15 >seq234 Length=462357 Score = 268 bits (296), Expect = 1e-66 Identities = 472/688 (69%), Gaps = 0/688 (0%) Strand=Plus/Minus Query 37010 ATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTAC 37069 ||| |||||| ||||||| ||||| ||||| ||| ||| || ||||||| | || Sbjct 280930 ATCGGCAACATATTCTATATATTTGCACATACTTTCGCTGTTCATGCCAATTAAGTCGAC 280871 Query 37070 TGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAAC 37129 ||| | || ||| | ||| |||||| ||| | || |||||| | | ||| | | Sbjct 280870 TGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTATTTCCAA 280811 Query 37130 AATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACA 37189 ||| ||||| | | || | | | |||| |||||||| ||| ||||| ||||| Sbjct 280810 AATCCGTTCTTTACTCGGTTTTTGTATCAAATGTTTAAACATTAATACCGCAAATTCACA 280751 Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 || || |||||||| | ||||| ||||||||| || ||||| |||||||||| || Sbjct 280750 GTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAATGTTAAACCTGGCATTATTCC 280691 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 | ||| || | ||||||||| | || || ||| |||||| |||||||| || || Sbjct 280690 ACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTGCCACTAAAGAATATACCTTCGACGGC 280631 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369 || || |||| | ||| ||| ||| | | || || ||||| | | Sbjct 280630 AGCGAAAGCTATTACACGCTCACCAAAATTAGCCGAATGCGATGATATCCAAGCTAGAGC 280571 Query 37370 CCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGttttt 37429 ||| || ||||| ||||| || ||||| ||||| || || || ||| | | Sbjct 280570 CCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAATAGATATTCACG 280511 Query 37430 ttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATT 37489 ||||| ||| | ||||| || || || ||||||||||||||||| ||||| | ||| Sbjct 280510 TTCTTTTTCATCCATGATATATGTTTCGATAAGTAAACTATACATTTCCGAGTGCACATT 280451 Query 37490 TTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAA 37549 ||| || || || |||||||||||||| || | |||||| | || |||||| || | | Sbjct 280450 TTCCATGGCAATTTGAAAACCATAAAAGCAACGAGCTTCGGTTATTTGAACCTCTTGGGA 280391 Query 37550 AAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC 37609 ||| | | |||| || |||||||| || ||||| || ||||| ||||| | ||| Sbjct 280390 AAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAAAC 280331 Query 37610 ATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGA 37669 || | |||||||| | ||| | | ||| |||||||| | || ||||| || Sbjct 280330 ATGTGAAATAAAATGCCGTTCGCCGTCGCTTAACCGATTCCAATCGTCCATGTCTTTAGA 280271 Query 37670 TAAATCAACTTCATCAACGGTCCAAAAA 37697 | |||||| || ||| | ||||||||| Sbjct 280270 GAGATCAACCTCCTCAGCAGTCCAAAAA 280243 >seq624 Length=93322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 153287 AGGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGC 153346 ||| || |||||||||||||| ||| | || |||||||| ||| | ||| | |||||||| Sbjct 17193 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATGTGGGAAGTGC 17252 Query 153347 TAATATGGATTGGAGATCACTAACTCAAGTAAAAGAATTAGG 153388 |||||||| ||||| || | |||||||| ||||| ||||| Sbjct 17253 GAATATGGACTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 17294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592300474268200