Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq135 111 3e-20 >seq135 Length=742707 Score = 111 bits (122), Expect = 3e-20 Identities = 183/263 (70%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 25039 CAGAAATTTCGAAATCACTTAAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCGT 25098 |||||||||| | ||| | ||||| | || |||||| || | ||| | ||||||| Sbjct 463962 CAGAAATTTCAAGATCTTTAAAATCGCTAGCTAAAGAACTTCAAGTTCCTGTAATCGCGT 464021 Query 25099 TATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGACT 25158 ||||||| ||||| ||| || | ||| | || ||||| | || || || ||||| | Sbjct 464022 TATCACAACTTAATCGAAGTTTAGAACAACGATCTGATAAAAGGCCGATCAATTCAGATT 464081 Query 25159 TGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGACG 25218 | | || ||||| | || || |||||||| ||| |||| || || || ||||| | Sbjct 464082 TAAGAGAATCTGGATCTATCGAGCAGGATGCAGATGTAATTATGTTTATTTATCGAGATG 464141 Query 25219 AAGTGTATAACCCCGACAGCTCTGAC---AAAGGCATTGCCGAGATTATCATTGGCAAAC 25275 |||||||||| ||| | |||| ||||| || || || ||||| | || |||| Sbjct 464142 AAGTGTATAA---CGAAAATAATGACACAAAAGGAATAGCGGAAATTATTTTAGGAAAAC 464198 Query 25276 ACAGGAATGGCGAGCTAGGCACA 25298 | | |||||| | |||| ||| Sbjct 464199 AACGTAATGGCCCGATAGGAACA 464221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101526941510880