Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq135 134 3e-27 >seq135 Length=742707 Score = 134 bits (148), Expect = 3e-27 Identities = 235/342 (69%), Gaps = 0/342 (0%) Strand=Plus/Minus Query 4176 ACCAAGCATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATCCTG 4235 ||||||||||||||| | || || || || || | ||| ||| | | |||| || Sbjct 464722 ACCAAGCATTTGCATAGAACCGTTAATACCTACAATAATTTCTGTAATATATTTATCTTG 464663 Query 4236 TCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGAGCC 4295 ||| ||||| || |||||||||||||| | | ||||||| | ||| || | ||| || Sbjct 464662 TCCACTTTGGTCTTGCCATTTTCTTGTTTGTAGACTTCCTTCGACATACACTTGAGAACC 464603 Query 4296 TTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGCCA 4355 |||| | |||||| | || ||||| || ||||| || | || || | |||||| Sbjct 464602 TTTTTTTAAATATTCTCCTGCTATTTCAGCAAGTTTTCCAAAAAAAACTACTCTGTGCCA 464543 Query 4356 CTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAAC 4415 || || | || || ||||| || | ||||||||||| | ||| || ||||||| Sbjct 464542 TTCAGTTTTTTCTTTCATTTCTCCGGTATTTTTATCACGCCAATTTTCAGATGTAGCAAG 464483 Query 4416 TGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCAAG 4475 ||||| |||| || || |||| ||| ||| | || ||||||| || || | Sbjct 464482 TGTAATATTTGTAACAGCGTTTCCATTAGGTATATAACGTATATCTGGATTTTGTCCTAA 464423 Query 4476 GCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 4517 | ||||| | || || ||||||| |||||| || | ||| Sbjct 464422 ATGCCCAATTAAAATTACTTTATTTATGCCTCTACTAGTCAT 464381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126742281245680