Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq15 87.8 2e-12 seq19 86.0 5e-12 >seq15 Length=3179940 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 28549 TAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAAC 28608 ||||||||||||| || || ||||| | || || ||||| ||||| ||| || | Sbjct 2518858 TAAAAATGCAAATTTTCGTTAAAACTCTTACTGGCAAAACTATTACTTTGGAAGTTGAGC 2518917 Query 28609 CTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 |||| || || | | || ||||| ||||| || ||||| || | || || Sbjct 2518918 CTTCCGACACTATTGAAAATGTCAAGGCCAAAATTCAGGATAAAGAAGGCATTCCTCCAG 2518977 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 ||||||| | | || || || |||||||||||||||||| || | |||| | Sbjct 2518978 ATCAACAACGTTTGATTTTCGCTGGCAAACAATTGGAAGATGGACGCACGTTATCCGACT 2519037 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||||| ||||| || || || ||||| ||||| | | | || || || ||||| Sbjct 2519038 ATAACATACAAAAGGAGTCGACATTGCACTTGGTACTCCGTCTCCGCGGTGGCATAAT 2519095 >seq19 Length=2240402 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 |||||||||||| ||||| ||||||||||| || ||||| ||||| ||| ||||| Sbjct 931745 AAAAATGCAAATCTTTGTGAAAACATTAACTGGCAAAACTATTACTTTGGAAGTTGAACC 931804 Query 28610 TTCAGAGACGGTGGCCGAT-CTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAG 28668 || || || | | || | |||| |||| || || || || || | ||| || Sbjct 931805 ATCGGATACTATCGAAAATGTTAAAGCTAAAATTC-AAGATAAGGAAGGTATTCCCCCAG 931863 Query 28669 ATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 28728 |||| || | | || ||||| ||||| ||||||||||| || || |||||| Sbjct 931864 ATCAGCAACGTTTGATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACCTTGTCCGATT 931923 Query 28729 ATAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 | |||||||| || || || || |||| |||| Sbjct 931924 ACAACATTCAGAAGGAGTCGACATTGCATTTGGT 931957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425393367910695