Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq135 98.7 5e-16 seq145 91.5 7e-14 >seq135 Length=742707 Score = 98.7 bits (108), Expect = 5e-16 Identities = 147/205 (72%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 36164 CTTGACTCATCATTCTTGCTTGTAAAGCAATTTTAGCTTCTCCACTTTCACCTTCTAACT 36223 |||||||||||||||||||| |||| | || | || || ||||||| |||| | Sbjct 150615 CTTGACTCATCATTCTTGCTGCTAAACCTATGTGCAAATCGCCTATTTCACCGTCTATTT 150674 Query 36224 CAGCTTTTGGAACCATAGCTGCAACACTATCTACGATAATTAAATCAACTTCTCTAGAGT 36283 ||||||||||| | ||||||||| |||||| ||||||||||||||| ||| || | Sbjct 150675 CAGCTTTTGGAGTTAATGCTGCAACAGAATCTACTATAATTAAATCAACTGCTCCTGATT 150734 Query 36284 TTATTAA---AGCTCTAATCGCTTCAAATGCCATCTCTCCATAAGTTGGTTGAGAGATAT 36340 | |||| | | | ||| ||| ||||| |||||| | |||||||| | || Sbjct 150735 TAGTTAAAACATCACAAAT---TTCTAATGCTTGCTCTCCTGTATCAGGTTGAGA-ACAT 150790 Query 36341 ATAA-ATCATCAACATTAACTCCTA 36364 | || ||||| || || || |||| Sbjct 150791 AAAAGATCATTAATATCTACACCTA 150815 >seq145 Length=640502 Score = 91.5 bits (100), Expect = 7e-14 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 ||| ||| | | ||| || | ||| || ||||||| ||||||||||| || | || | Sbjct 132553 CTCCACTCTTTTCATGAACAGATCCGGTATCCACAGAGCATAAAATAAGTCCCGTGCACG 132612 Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 || ||||| || ||| ||||| | || || || || |||||||||| |||||| Sbjct 132613 ATCCTCCTCTTTACCCGTATTTTTTTTCAAATTTAGAAATTCGAAAATATCTGCGTGCCA 132672 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 || ||||| || ||||||||| || | |||||| |||||||| || || || | Sbjct 132673 AGGCTCTAAGTATATAGCAAAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACG 132732 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAAC 26133 ||| | ||||| | |||||| ||||| Sbjct 132733 GGCAACATTGTTGAACAAACGCAACATAGGAAC 132765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253033199945375