Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq365 127 2e-24 >seq365 Length=266026 Score = 127 bits (140), Expect = 2e-24 Identities = 347/517 (67%), Gaps = 16/517 (3%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||| || || ||||| || || ||||| || ||||||||||| Sbjct 117892 ACTCCAATAGGTCCCATGCCCGGTCCGCCACCGCCGTGAGGAATGCAAAATGTCTTATGC 117833 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||||| |||| | ||||| ||||| || | || || ||| || ||||| Sbjct 117832 AAATTTAAATGAGAAACATCACTTCCATAATCTCCAGGACGGCATAAACCCACTTGTGCG 117773 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| ||||| || || || |||| | ||| | | | || | Sbjct 117772 TTCATATTGGCGCCATCCAGATACACTTGTCCTCCATGGCGATGTATAAGGTCGCAAA-- 117715 Query 138363 TGTCTGATGTTTGT---TTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 |||||| | |||| ||| || || || ||| || |||||||||| ||| | ||| Sbjct 117714 TGTCTG-TAATTGTCTCTTCGAAAACTCCCATAGTTGAGGGATATGTAACCATGACACAG 117656 Query 138420 GAGAGTTCAAATG--TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477 || || | | || | |||| || |||||| | |||| | ||||||||| | | Sbjct 117655 GAAAGATTACTTGCATGTTCA-GA-TGCTTTATCGCGCAGATGTGCCATGTCTATGCTTC 117598 Query 138478 CATCA-TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGA 138536 ||||| | | || | | | | |||||||||| || ||||| ||| ||||||| Sbjct 117597 CATCAGAAAGTATACGT-ATAGGTTCAACTTTCATGCCGGCCATTTGAGCAGAAGCAGGA 117539 Query 138537 TTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCC 138595 || || ||||| || || || || | ||| ||||||| | | || | | | | Sbjct 117538 TTCGTACCATGCGCAGAAATGGGAATTAAACAAACATTTCGGTGTCCTTCTTTACGGTGC 117479 Query 138596 TTGATGATATGCT-TGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAG 138654 | ||| || ||| | || ||| || || ||||| || || || | || | || | Sbjct 117478 -TCATGGTA-GCTGCGTATAGCTCGTAGGCCCGCATATTCGCCTTGAGCACCAGAATTGG 117421 Query 138655 GTTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691 |||| || ||||| |||| |||||||||| ||||| Sbjct 117420 GTTGAAACGATATTTTATCATAACCTGTGATTTCACA 117384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578982441356600