Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_021796.1 Length=72534 Score E Sequences producing significant alignments: (Bits) Value seq135 82.4 4e-11 >seq135 Length=742707 Score = 82.4 bits (90), Expect = 4e-11 Identities = 122/172 (71%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 2564 AAAGCAACTCCTCCACCTGAAACAATTCCTTCTTCTAGGGCAGACCTTGTAGCATTAATA 2623 ||||| || ||||| |||| ||||| ||||||||||| || | | ||||||| | | Sbjct 174499 AAAGCTACGCCTCCTCCTGCAACAACTCCTTCTTCTACTGCTGCACGAGTAGCATGTAAA 174558 Query 2624 CTATCCTCTACTCTATCTTGCTTCTCCTTCAACTCACTATCGGACTTTGCCCCTACATAA 2683 ||| ||||||||| ||| ||||| |||| ||| |||| || ||||| | | Sbjct 174559 GCATCTTCTACTCTAGCTTTTTTCTCTTTCATTTCAACTTCGGTTGCGGCTCCTACTTTA 174618 Query 2684 ATAGTAGCTACGCCTCCTGTTATTCTAGATAACCTTTCTTGAAGGTCTTTCT 2735 || |||||| || |||| || ||| || | |||||||| || ||||| Sbjct 174619 ATTACAGCTACTCCCCCTGCTAACTTAGCTACGCGTTCTTGAA-GTTTTTCT 174669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231977765792475