Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq135 93.3 7e-14 seq54 84.2 4e-11 >seq135 Length=742707 Score = 93.3 bits (102), Expect = 7e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 120225 TTTGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCG 120284 || ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 481725 TTAGCCGGTATAGCTCAGATGGAAGAGCAACTGACTTGTAATCAGTAGGTCGAAGGTTCG 481784 Query 120285 ATCCCTGATGCCGGCA 120300 | ||| |||||||| Sbjct 481785 ACTCCTTTTGCCGGCA 481800 >seq54 Length=1154455 Score = 84.2 bits (92), Expect = 4e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 35580 GTAGTGTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACG 35639 || ||||| ||| || || || |||||||||||||| ||||||| | || || ||| Sbjct 644183 GTGGTGTTTGAGAATTCGAGTGTAACATGACCTTCCCATCCAGGTTCTAAGGGAGTAACG 644242 Query 35640 TTGACGATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTG 35699 || || || || ||||| | ||||| || ||||| | ||| | || || || || Sbjct 644243 TTTACTATAATTCCACACCTTGCGTAAGTTGATTTACCAACACAAATGACCAGTACATTT 644302 Query 35700 CGCGGAATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAAT 35755 | || || || || ||||| || |||| ||| || | ||||| || || ||||| Sbjct 644303 CTTGGTATACGAAAATATTCCACTGTGCTTGCAAGCACAAAGCTATTTGGTGGAAT 644358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825894035668200