Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq192 118 7e-22 seq19 89.7 3e-13 >seq192 Length=539225 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34750 TCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||| || | ||| | || || || || | |||| || || ||||| ||||| || || Sbjct 278429 TCCACCTCGCAAACGCAACACAAGATGTAAGGTGGATTCTTTTTGAATATTATAATCGGA 278370 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 | |||| |||| |||| ||||||||||||||| |||| |||||||||||| | || Sbjct 278369 CAATGTGCGACCATCTTCCAATTGCTTTCCGGCGAAAATCAATCGTTGCTGGTCGGGTGG 278310 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | ||||| ||||| | || || ||| || | | || | || || ||||| Sbjct 278309 AATTCCCTCTTTGTCCTGAATCTTGGCTTTTACATTTTCGATAGTGTCCGAGGGTTCGAC 278250 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || |||||||| ||||| ||||| |||||||| |||||||| Sbjct 278249 CTCAAGAGTGATGGTCTTGCCCGTTAGGGTTTTTACAAAAATCTGCAT 278202 >seq19 Length=2240402 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || | | |||| | || |||| |||||| || || || Sbjct 933547 CTCCTTCTGAATGTTGTAATCGGACAAGGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAA 933488 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| |||||||| ||| | || | || |||||||| | || || |||||| Sbjct 933487 AATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTT 933428 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | |||||| || | ||| |||||||| || || | || || || Sbjct 933427 TTCAATAGTGTCGGAAGGCTCGACTTCTAAGGTGATGGTCTTGCCAGTCAATGTTTTGAC 933368 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 933367 AAAAATTTGCAT 933356 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || || || || | | |||| | || |||| |||||| ||||| || Sbjct 933775 CTCCTTCTGAATATTGTAATCGGACAAGGTGCGTCCGTCTTCCAATTGCTTACCGGCAAA 933716 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| || ||||| ||| | || | || |||||||| | ||||| |||||| Sbjct 933715 AATCAAACGCTGCTGATCTGGGGGAATACCTTCCTTGTCCTGAATTTTAGCCTTGACGTT 933656 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | |||||| || | ||| |||||||| || || | || || || Sbjct 933655 TTCAATGGTGTCGGAAGGCTCGACTTCTAGGGTGATGGTCTTGCCAGTCAATGTTTTGAC 933596 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 933595 AAAAATTTGCAT 933584 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| || || || | |||| | || |||| |||||| || || || Sbjct 932168 CTCCTTCTGAATGTTGTAATCGGACAAAGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAA 932109 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| |||||||| ||| | || | || |||||||| | || || |||||| Sbjct 932108 AATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTT 932049 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | |||||| || | ||| |||||||| || || | || || || Sbjct 932048 TTCAATAGTGTCGGAAGGCTCGACTTCTAAGGTGATGGTCTTGCCAGTCAATGTTTTGAC 931989 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 931988 AAAAATTTGCAT 931977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325684047514895