Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_023574.1 Length=128546 Score E Sequences producing significant alignments: (Bits) Value seq135 107 2e-18 >seq135 Length=742707 Score = 107 bits (118), Expect = 2e-18 Identities = 308/471 (65%), Gaps = 2/471 (0%) Strand=Plus/Minus Query 68110 TGATGGTGACGAACAATTGGCTCTTAACATTGCGCATGAAATGATTTCACAAACCTATCA 68169 || ||| ||||| ||| ||| || ||| | | ||||| |||| || | ||| Sbjct 587708 TGGTGGAAACGAATTATTTGCTACAAATATTATGAAAGAAATACTTTCTGGAAGATTTCA 587649 Query 68170 ACCTGCAACACCAACATTCTCTAATGCTGGTAAGTTGCGTGGTGGTAATGCTGTATCATG 68229 ||| || || ||||| || | ||| |||||| | |||| | | ||||||| Sbjct 587648 ACCGGCCACTCCAACTTTTTTAAATTGTGGTAAAAAACAACGTGGAGAATATATATCATG 587589 Query 68230 TTTCCTTTTGAATATTGAAGATAATATGACGTCTATTGGGCGCTCAGTAAATTCAGTTCT 68289 ||| | || ||| |||||||||||| |||||||| || || ||||| ||| | | Sbjct 587588 TTTTTTATTACGTATAGAAGATAATATGGAATCTATTGGACGTGCAATAAATGCAGCTTT 587529 Query 68290 TCAATTGTCTAAAATGGGTGGTGGAGTTGGAATCAACTTAACTGATATCCGTCCGTCAGG 68349 || | || |||| || || ||||| | | ||||| || | | |||||| Sbjct 587528 ACAGCTTTCCAAAAGAGGCGGAGGAGTATCATTTTTATTAACAAATTTAAGAGAGTCAGG 587469 Query 68350 AGACCCTATCAAGGGTATTGAGAATATGGCTGATGGAGTTGTTCCAATCATGAAACT-CT 68408 || || || || |||| | ||| || |||| || | ||| |||||||| | || Sbjct 587468 AGCTCCCATTAAATATATTAAAAATCAATCTTCTGGAATTATACCAGTCATGAAAATGCT 587409 Query 68409 ATGAAGATTCATTTTCATATGCCAATCAGTTGGGGACAAGAAATGGGGCAGGAGTAACTT 68468 | |||||| | || || || || ||||| || || | || | || || |||| | Sbjct 587408 A-GAAGATGCTTTCTCTTACGCAAATCAATTAGGTGCTCGACAAGGAGCTGGAGCTGTAT 587350 Query 68469 ATCTCAATGTATTCCATAAAGATATTGTTAAATTCCTCTCTACaaaaaaaGAAAATGCTG 68528 || | ||| ||| |||||| | ||||| | || |||||||||||||| | Sbjct 587349 ATTTGCATGCTCATCATCCTGATATTTTAAAATTTTTAGACACTAAAAAAGAAAATGCCG 587290 Query 68529 ACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGTGTTGTAGTTCCTGATA 68579 | |||||| || | | |||||| | ||| | |||||| | ||||||||| Sbjct 587289 ATGAAAAAATTAGAATAAAAACTTTATCTTTAGGTGTTATTATTCCTGATA 587239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411211349040535