Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq135 129 2e-25 >seq135 Length=742707 Score = 129 bits (142), Expect = 2e-25 Identities = 240/352 (68%), Gaps = 3/352 (1%) Strand=Plus/Plus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||| | || ||||| |||| || || || |||||||| || | || ||| ||||||| Sbjct 464381 ATGACTAGTAGAGGCATAAATAAAGTAATTTTAATTGGGCATTTAGGACAAAATCCAGAT 464440 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 | || ||| |||| | || ||| || |||| || ||| | || || ||||| | Sbjct 464441 ATACGTTATATACCTAATGGAAACGCTGTTACAAATATTACACTTGCTACATCTGAAAAT 464500 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| ||||| | |||||| | ||||| ||||| || |||||| |||| ||| Sbjct 464501 TGGCGTGATAAAAATACCGGAGAAATGAAAGAAAAAACTGAATGGCACAGAGTAGTTTTT 464560 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| || || |||||| | || || ||||| | |||||| ||||| || ||| | Sbjct 464561 TTTGGAAAACTTGCTGAAATAGCAGGAGAATATTTAAAAAAAGGTTCTCAAGTGTATGTC 464620 Query 38434 GAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACACAATA 38493 ||||| || |||| | || |||| || ||||| || || || ||| | | | Sbjct 464621 GAAGGAAGTCTACAAACAAGAAAATGGCAAGACCAAAGTGGACAAGATAAATATATTACA 464680 Query 38494 GGCATTGTGGTTCAGGGTTACAATGGTGTAATGCAAATGCTTGGTAGCAAAC 38545 | ||| | || ||| || ||| |||||||||||||||| |||| Sbjct 464681 GAAATTATTGTA---GGTATTAACGGTTCTATGCAAATGCTTGGTACGAAAC 464729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132895720117510