Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq60 107 3e-18 >seq60 Length=1147763 Score = 107 bits (118), Expect = 3e-18 Identities = 197/287 (69%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 |||||| | ||||| | |||||||| || || ||||| ||| ||| || Sbjct 701421 GCTAAAATGTATGGTTTCTGGATTGTTGTCAATTATCGAGAGGCTTACAACATGTTTGCT 701362 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 | | ||| ||| | || || || || ||||| ||||| ||||| | |||||| ||||| Sbjct 701361 TGCAATGGAATTTTGTTTAATCACGAATCACCGCGACGTGGTGAAAATTTCGTGACCCGC 701302 Query 161528 AAGATTACTAGGGGACTATCCCGTATTAGTACAGGA--CTACAGGATTGTCTATACCTAG 161585 || |||||| | || || ||| || || | | ||| ||| | | | | Sbjct 701301 AAAATTACTCGTTCCGTAGCCAAAATT--TATTTGAACCAATTGGAATGTTTTGAGTTGG 701244 Query 161586 GTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGT 161645 | ||||| |||||| ||| |||||||||||||| || ||||| || || |||||| Sbjct 701243 GCAATCTCGACTCAAAACGTGATTGGGGTCATGCCATGGATTATGTAGAAGCCATGTGGA 701184 Query 161646 TGATGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGT 161692 |||||||||||| || || ||| || ||||||||||| || ||| Sbjct 701183 TGATGTTACAACGTGACACACCTTCCGATTATGTGATTGCTACGGGT 701137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729909481315400