Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq135 95.1 1e-14 >seq135 Length=742707 Score = 95.1 bits (104), Expect = 1e-14 Identities = 319/484 (66%), Gaps = 16/484 (3%) Strand=Plus/Minus Query 107136 CCTGTTATGAAAATGCTAGAAGACGGTTTCCGGTACGCAAATCAGTTAGGGCAAAGACAA 107195 || || ||||||||||||||||| | |||| ||||||||||| ||||| ||||| Sbjct 587425 CCAGTCATGAAAATGCTAGAAGATGCTTTCTCTTACGCAAATCAATTAGGTGCTCGACAA 587366 Query 107196 GGTGCAGGCGCAGTCTATCTAAATGTTTTCCATGCGGATATTATGGACTTTTTATCAACT 107255 || || || || || ||| | ||| | ||| | |||||| | | |||||| ||| Sbjct 587365 GGAGCTGGAGCTGTATATTTGCATGCTCATCATCCTGATATTTTAAAATTTTTAGACACT 587306 Query 107256 AGAAAAGAAAATGCAGAATCCGCAAAGCA-AATCAAAACACTTTCTTTGGGAGTAGTTGT 107314 | |||||||||||| | || ||| | ||| ||||| | ||||| || || || | Sbjct 587305 AAAAAAGAAAATGCCG-ATGAAAAAATTAGAATAAAAACTTTATCTTTAGGTGTTATTAT 587247 Query 107315 TCCCGATA--AATTTT--ATGAGCTAGCTGAGTCTGGGGATGTAATTCACTTATTTTCTC 107370 ||| |||| | |||| || ||| | || | ||| ||| |||||||||| Sbjct 587246 TCCTGATATTACTTTTCAATTAGC-AAAAGAAAATAAGGA---AATGTGTTTATTTTCTC 587191 Query 107371 CATATGATGTTGCTAAAGAATACGGTGTACCATTCTCATTTGTAGACATTGATTCAGAAT 107430 |||| ||| ||| |||| || || |||||| ||| ||| ||| | | | Sbjct 587190 CATACGATATTGAAAAAGTTTATCGTCAACCATTTTCAGAATTAGTTATTAGTGAACTTT 587131 Query 107431 ACAATAACATGATTCAGAACCCAAA--TATCAGAAGTAAGGTAATGAATGCACGAGATTT 107488 | |||| | ||| | || ||| || | || | | || |||||||| |||| Sbjct 587130 ATCATAA-TTTATT-AAAAGATAAACGAATTAAAAAAACTGCTATTAATGCACGTAATTT 587073 Query 107489 GGAAGAAGAAATTAGCCG-TTTACAACAAGAGTCAGGTTACCCATATATTATGAATGTTA 107547 || |||||||| | | ||| || || || || |||||||||||| || Sbjct 587072 TTTTCAA-AAATTAGCTGAGATTCAATTTGAATCTGGGTATCCATATATTATGTTTGAAG 587014 Query 107548 GTACTGTAAATAAAGCCAATCCTATTGATGGCAAAATCATTATGAGTAATTTATGCAGTG 107607 ||||||||| | ||||||||| ||| | || | |||||||||||||| || Sbjct 587013 ATACTGTAAACCGTACTAATCCTATTTCTGGACATATTAACATGAGTAATTTATGTTCTG 586954 Query 107608 AAAT 107611 |||| Sbjct 586953 AAAT 586950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465516768840400