Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq145 104 3e-17 >seq145 Length=640502 Score = 104 bits (114), Expect = 3e-17 Identities = 180/259 (69%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 53498 GTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAG 53557 || |||||| | || | |||||||| ||||| || ||| |||| |||||||| || Sbjct 132765 GTTCCTATGTTGCGTTTGTTCAACAATGTTGCCCGTTATGTCGACCAAGGTGGTGGAAAA 132706 Query 53558 CGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTC 53617 || |||| | || || || ||| | ||||| |||||||| || ||| | || ||||| Sbjct 132705 CGTCCGGGGGCTTTTGCTATATACTTAGAGCCTTGGCACGCAGATATTTTCGAATTTCTA 132646 Query 53618 GAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCT 53676 | || ||| |||| | || ||| || ||| || ||| | ||| ||||| Sbjct 132645 AATTTGAAAAAAAATACGGGTAAAGAGGAGGATCG-TGCACGGGACTTATTTTATGCTCT 132587 Query 53677 GTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTG 53736 |||||| ||||| || |||||| ||| |||||| || ||| | |||| || ||||| Sbjct 132586 GTGGATACCGGATCTGTTCATGAAAAGAGTGGAGGCTGATGAGCATTGGTCTCTAATGTG 132527 Query 53737 CCCGAACGAGTGCCCCGGC 53755 ||| | | ||||| ||| Sbjct 132526 CCCCCATAAATGCCCTGGC 132508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547200917359000