Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq135 86.0 7e-12 seq54 82.4 8e-11 >seq135 Length=742707 Score = 86.0 bits (94), Expect = 7e-12 Identities = 87/111 (78%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 69866 GCTCTACCAAACTGAGCTACA-CGGAGTAAATTAAATTGGAGCGGATAATGAGAATCGAA 69924 |||||||| ||||||||| | | | || ||| ||| ||||| | || || ||||| Sbjct 482089 GCTCTACCCTACTGAGCTATATCAGCTTAGCTTATATT--AGCGGGCAGTGGGAGTCGAA 482032 Query 69925 CTCACATCATCAGATTGGAAGTCTGAGGTAATGCCATTATACGATATCCGC 69975 | ||||||||||| ||||||| ||||| |||| |||||||||||| |||| Sbjct 482031 CCCACATCATCAGCTTGGAAGGCTGAGATAATACCATTATACGATGCCCGC 481981 >seq54 Length=1154455 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 68831 GGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACCACTGAGCTAC 68885 |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct 287265 GGATTCGAACCAGCGACCAATTGGTTAACAGCCAACTGCTCTACCACTGAGCTAC 287211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546378540026400