Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq135 205 6e-48 >seq135 Length=742707 Score = 205 bits (226), Expect = 6e-48 Identities = 478/721 (66%), Gaps = 0/721 (0%) Strand=Plus/Minus Query 96700 ATAGTTATCAAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCC 96759 ||||||||| || | || ||| || |||||| ||||| | || || || ||||| Sbjct 464266 ATAGTTATCGAATCTAGATAATTTTCCATTAAAAATCAATCGAATTGTTCCTATCGGGCC 464207 Query 96760 ATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCTATCCGGGTGATA 96819 ||| ||||| ||||| | ||| | || || || || || | || ||| || ||| Sbjct 464206 ATTACGTTGTTTTCCTAAAATAATTTCCGCTATTCCTTTTGTGTCATTATTTTCGTTATA 464147 Query 96820 AACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTC 96879 ||||| || ||||| | |||||| || | ||||| |||||||| || | ||| ||||| Sbjct 464146 CACTTCATCTCGATAAATAAACATAATTACATCTGCATCCTGCTCGATAGATCCAGATTC 464087 Query 96880 ACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTG 96939 | |||||||||||| | ||| | ||| || | || ||||| | |||||||||||| Sbjct 464086 TCTTAAATCTGAATTGATCGGCCTTTTATCAGATCGTTGTTCTAAACTTCGATTAAGTTG 464027 Query 96940 TGACAATGCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAAT 96999 ||| || || | || || ||||| | ||| || || | || || | || | ||||| Sbjct 464026 TGATAACGCGATTACAGGAACTTGAAGTTCTTTAGCTAGCGATTTTAAAGATCTTGAAAT 463967 Query 97000 CTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGACGCGCATAAGTTGCAGGTA 97059 || |||||||| | | || |||| | || | |||||||||||| ||| Sbjct 463966 TTCTGCAATTTCTAATGCTCTATTATTAAATATTGTAGGAGCATGCATAAGTTGCAAGTA 463907 Query 97060 GTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACACGACGAGCGCGGGAACG 97119 ||||||||||| | || || || ||| ||| | ||| ||| | | | ||| || Sbjct 463906 ATCGATCATAATTAAACTTAATCCTGCATGTTCACGAAAAATACGTCTTGATCTGGAGCG 463847 Query 97120 TAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAATATTCTGCTTGTCCAACAG 97179 | ||||| |||| || ||||| ||| |||| |||| || | | || Sbjct 463846 AATTTCTGTTACTGTCAATTTAGAAGAATCATCGATATAAATGTTCTTTTTTTTTAGCAA 463787 Query 97180 AATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGAAT 97239 || | || || || | || | |||||| || | || | ||| || |||| | Sbjct 463786 TATTCGCACTGTATTCGATATACGAGACCAATCTTCTTTTTTTAATTGACCAGTTCTTAA 463727 Query 97240 ACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTCGG 97299 || | ||||| || | | | ||| | ||| |||||||| | ||| | ||| | Sbjct 463726 TTGACTTTGATCTACTCTCGATAAAGATGAAAGTATACGCATCATAATCTGTTCGCTTGA 463667 Query 97300 CATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAACTGCGGCATTTTCGACGAG 97359 ||| || || ||||||| || ||||| ||||| | | | || |||| ||| | Sbjct 463666 CATTTCTAGACTAAAAATTAAAACGGGTTTATCTTCATTTATGGCAGCATATTCACATAA 463607 Query 97360 ATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAATGATGAGATCGGA 97419 ||| || ||||| || || |||||||| || || || ||||| | ||| || ||||| || Sbjct 463606 ATTAATAGCAAAAGTCGTTTTCCCCATTGAAGGTCGAGCGGCAATAATAATTAGATCTGA 463547 Query 97420 C 97420 | Sbjct 463546 C 463546 Score = 95.1 bits (104), Expect = 8e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 44805 CCTTCGATGTAGACCTGAGAACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTT 44864 ||||||| || || |||||||||||| |||||| || | || ||||||||||||||| Sbjct 464625 CCTTCGACATACACTTGAGAACCTTTTTTTAAATATTCTCCTGCTATTTCAGCAAGTTTT 464566 Query 44865 CCGAACAAAACGACTTTATGCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCG 44924 || || ||||| ||| | |||||||| |||| |||||| || || || | || || Sbjct 464565 CCAAAAAAAACTACTCTGTGCCATTCAGTTTTTTCTTTCATTTCTCCGGTATTTTTATCA 464506 Query 44925 CGCCA 44929 ||||| Sbjct 464505 CGCCA 464501 Score = 82.4 bits (90), Expect = 5e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 98319 TGGCCCCTACCGGACTTGAACCGGTGACCGTGCGATTATGAGTCGCCAGCTCTAACCACT 98378 |||||| | | ||| ||||||| | |||| |||||||||||||||| ||||| ||| || Sbjct 423675 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCTCT 423734 Query 98379 GAGCTAAAGGGCC 98391 ||||||||||||| Sbjct 423735 GAGCTAAAGGGCC 423747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330890307601030