Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq135 120 8e-23 >seq135 Length=742707 Score = 120 bits (132), Expect = 8e-23 Identities = 233/343 (68%), Gaps = 1/343 (0%) Strand=Plus/Minus Query 26640 ACCAAGCATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATCCTG 26699 ||||||||||||||| | || || || || || | ||| ||| | | ||| || Sbjct 464722 ACCAAGCATTTGCATAGAACCGTTAATACCTACAATAATTTCTGTAATATATTTATCTTG 464663 Query 26700 TCTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAACC 26759 || ||||| || |||||||||||||| | | | ||||| | ||| || | |||||| Sbjct 464662 TCCACTTTGGTCTTGCCATTTTCTTGTTTGTAGACTTCCTTCGACATACACTTGAGAACC 464603 Query 26760 TTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTGCCA 26819 |||| | ||| || | || ||||| || ||||| || | || || | |||||| Sbjct 464602 TTTTTTTAAATATTCTCCTGCTATTTCAGCAAGTTTTCCAAAAAAAACTACTCTGTGCCA 464543 Query 26820 CTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAAC 26879 || || | || || ||||| || | ||||||||||| | ||| || ||||||| Sbjct 464542 TTCAGTTTTTTCTTTCATTTCTCCGGTATTTTTATCACGCCAATTTTCAGATGTAGCAAG 464483 Query 26880 TGTAAGGTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCATGCCCAA 26939 ||||| |||| || | |||| | | ||| ||| | || ||||||| || || | Sbjct 464482 TGTAATATTTGTAACAG-CGTTTCCATTAGGTATATAACGTATATCTGGATTTTGTCCTA 464424 Query 26940 GGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 26982 | ||||| | || || ||||||| |||||| || | ||| Sbjct 464423 AATGCCCAATTAAAATTACTTTATTTATGCCTCTACTAGTCAT 464381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129292614465050