Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq234 266 3e-66 seq624 98.7 1e-15 >seq234 Length=462357 Score = 266 bits (294), Expect = 3e-66 Identities = 474/689 (69%), Gaps = 2/689 (0%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || ||| |||| ||||||| ||||| || ||| || || |||| | || Sbjct 280930 ATCGGCAACATATTCTATATATTTGCACATACTTTCGCTGTTCATGCCAATTAAGTCGAC 280871 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 ||| | || || || || ||||||||| ||| |||||| | ||||||| | Sbjct 280870 TGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTATTTCCAA 280811 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| ||||| ||| ||| | | | |||| ||||||| ||| ||||| ||||| Sbjct 280810 AATCCGTTCTTTACTCGGTTTTTGTATCAAATGTTTAAACATTAATACCGCAAATTCACA 280751 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 || | ||||||||| | |||| ||||||||| |||||||| |||||||||| ||| Sbjct 280750 GTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAATGTTAAACCTGGCATTATTCC 280691 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| || | ||||||||| | ||| || || |||||| ||||| || || || Sbjct 280690 ACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTGCCACTAAAGAATATACCTTCGACGGC 280631 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 || || || | | ||| |||||| | || || || ||||| | | Sbjct 280630 AGCGAAAGCTATTACACGCTCACCAAAATTAGCCGAATGCGATGATATCCAAGCTAGAGC 280571 Query 23703 CCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT 23762 ||| | |||||| || || | ||||| ||||| || || || ||| | Sbjct 280570 CCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAATAGATATTCACG 280511 Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 ||||| | ||| | |||||||| || || ||||||||||||||||| || || | ||| Sbjct 280510 TTCTTTTTCATCCATGATATATGTTTCGATAAGTAAACTATACATTTCCGAGTGCACATT 280451 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882 ||| || ||||| ||||| |||||||| || | |||||| | | |||||| || | | Sbjct 280450 TTCCATGGCAATTTGAAAACCATAAAAGCAACGAGCTTCGGTTATTTGAACCTCTTGGGA 280391 Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 ||||| || ||||||| || |||||||||||||| || ||||| ||||| | ||| Sbjct 280390 AAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAAAC 280331 Query 23943 ATATTTTATAAAATGTCTTTCATCAGTTG-ATAATTTTTTCCAATCATTAATATCTTTTG 24001 || | |||||||| | ||| | || | ||| |||||||| | || ||||| | Sbjct 280330 ATGTGAAATAAAATGCCGTTC-GCCGTCGCTTAACCGATTCCAATCGTCCATGTCTTTAG 280272 Query 24002 ATAAATCAACTTCATCAACTGTCCAAAAA 24030 | | |||||| || ||| | ||||||||| Sbjct 280271 AGAGATCAACCTCCTCAGCAGTCCAAAAA 280243 >seq624 Length=93322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 17193 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATGTGGGAAGTGC 17252 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529 || ||||||||| | || | |||||||| ||||| ||||| Sbjct 17253 GAATATGGACTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 17294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521473626487000