Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq42 116 5e-21 >seq42 Length=1371130 Score = 116 bits (128), Expect = 5e-21 Identities = 210/303 (69%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 156165 AACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCG 156224 |||| ||||| | |||||||| || || || |||||||| | ||||| | ||| || Sbjct 632111 AACAGCCGTCTTATATTAGCTTCGGACTCGCCAACATATTTATCTAATACCTGAGGGCCA 632170 Query 156225 TTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAAT 156281 || || ||||| || || || || || | ||| | || ||||||||| || Sbjct 632171 TTTACAATTTTT--GGCTCACGAGCATTCAACATATTGC-CTATTTGGCGAGCCATCAAG 632227 Query 156282 GTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAAT 156341 ||||||||| ||||||||||| || ||||| | ||||| | ||| || ||||| | Sbjct 632228 GTTTTACCGGTACCAGGAGGTCCATACAACAAAATACCTTTGACATGCTTGCAACCCAGC 632287 Query 156342 TTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAA 156401 | |||| | ||| |||| ||| |||||||| || | || ||||| | Sbjct 632288 TGTTCAACCACTTCGGGAGGAAAGACTCTTGAAGCAAAAGCACGCCGGAAAATAGCATTG 632347 Query 156402 AATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT--TTATAGATATTT 156459 |||||||||||||| || || | |||||||| |||||| ||||| || |||| || Sbjct 632348 AATTCTTTATCCAAGCCGCCGATACCCATTTTGCCAAAATCCCAATCAGGATTGATAATT 632407 Query 156460 GAC 156462 ||| Sbjct 632408 GAC 632410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667056813739800