Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq33 91.5 3e-13 seq519 89.7 1e-12 seq91 89.7 1e-12 seq36 89.7 1e-12 >seq33 Length=1656226 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1400907 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1400848 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1400847 CCCCACGTTGGGC 1400835 >seq519 Length=44041 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 37324 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 37383 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 37384 CCCACGTTGGGC 37395 >seq91 Length=788834 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 158512 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 158571 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 158572 CCCACGTTGGGC 158583 >seq36 Length=1998672 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1082726 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1082667 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1082666 CCCACGTTGGGC 1082655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057801623386130