Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq556 823 0.0 seq724 342 1e-89 seq813 203 8e-48 seq439 95.1 3e-15 seq568 86.0 1e-12 >seq556 Length=23517 Score = 823 bits (912), Expect = 0.0 Identities = 1399/2007 (70%), Gaps = 34/2007 (2%) Strand=Plus/Minus Query 12775 TTGCAAATTGGCGATGAAGAAATATCGCTAAGCGAAGAAGATGACTCAATAGAAGGTAAA 12834 || || ||||||||||||||||| | | ||||| || ||| | || || || ||| Sbjct 11279 TTACAGATTGGCGATGAAGAAATCCCTTTGGCTGAAGACGACGACGCTATCGATGGCAAA 11220 Query 12835 CCTGCGCCTAAGTGGGTTAAAGATCTGAGAAAAGGTTTTAAAGAAACACAGAAAGAAAAT 12894 | ||||| | ||||| |||||||| | ||||| || ||||| |||||||||||||| Sbjct 11219 GCCGCGCCGCAATGGGTGAAAGATCTTCGTAAAGGGTTCAAAGACACACAGAAAGAAAAC 11160 Query 12895 CGCGATCTGAAACGTCAGCTTGAGGAATTAACCACCAAGCAGTCTC---ATCAATCGCAG 12951 || || | |||||||||||||| | ||| || | | | || | | Sbjct 11159 CGGGAATTACGGCGTCAGCTTGAGGAGCTTCAGTCCAGGCCGACGAGCGAGAAAACCCCC 11100 Query 12952 GTTAATCATAATAACGTTATTCCCGATAAACCCACCTTGGGATCGTGTGATTATGATGAA 13011 | |||| | || | | | | |||| ||| | | ||| |||||||| || Sbjct 11099 --TCATCAGACG--CGCCACTGCTAA--AACCGACCCTTGAGGGGTGCGATTATGACGAG 11046 Query 13012 GAAGTCTATGAAAAAGCACTTACCGATTGGCATGAGAACAAAAGCCATGTCGAACAAAAG 13071 | | |||| | ||| | || || ||||||||||| || ||||||| ||| || | | Sbjct 11045 GCGCGTTTTGAACAGGCATTAACTGACTGGCATGAGAAAAAGAGCCATGCCGAGCAGATG 10986 Query 13072 CAACAAGCA-CAGCAAAGGCAGCAACAAGAAGTTCAGGAACGATTTATTCAAC---GTTT 13127 | || ||| || || | ||||| ||||| ||| | || || | || | | || Sbjct 10985 AAGCA-GCAGCAACAGCGCCAGCAGCAAGACTATCAACA--GAATT-TCCAGCAGAGATT 10930 Query 13128 AAAGTCTCATCAACAACGCGCGGCTAAATTACCCGTTAAAGATTATACGGAGATGGAAGA 13187 | || ||| || |||||||| || | || || || ||||| |||||||||||| Sbjct 10929 ACAGCAGCATAAAGCGCGCGCGGCACAACTCCCGGTCAACGATTACGAGGAGATGGAAGA 10870 Query 13188 GGTTGTGCGATCAGAGGTACCCATATTACAGCAGGAAATTTTAATTCATGCGGCTGATGA 13247 | ||||| | ||| | ||| | || |||||||| | || ||||| ||||| || Sbjct 10869 CATCGTGCGCGCGGAGATTCCCGACCTGCAAAAGGAAATTCTCATCCATGCCGCTGACGA 10810 Query 13248 GGGAACAGAACTTATCGCCTATGCACTTGGAAAAAACAAAGCATTACGCCAGCGGCTGAC 13307 || | || | || || |||||||| || || ||| || | | ||||||||| | | Sbjct 10809 AGGCTCTGAGTTGATTGCGTATGCACTCGGCAAGAACCAAAAACTCCGCCAGCGGATCGC 10750 Query 13308 CGCTGAACATGATCCTATTCGTGCCGCGTTTCTGTTAGGCCAAATTAGCCAGAAGGTAAA 13367 |||||| ||||| |||| ||||| ||| || | |||||||| || || | | Sbjct 10749 CGCTGAGACCGATCCCCTTCGCGCCGCCTTTTTGCTGGGCCAAATCAGTCAACAAGCCCG 10690 Query 13368 ACTGGCCCCCAAACCTAAGAAAACCCCTAAACCAGAGCCTGAGCTAAAAGGGGGTGCTGG 13427 |||||| || || || | || | || ||||| ||||| ||| || || |||| | Sbjct 10689 ACTGGCACCGAAGCCCAGACAAGCGCCCAAACCTGAGCCGGAGGTACGCGGCGGTGGGGC 10630 Query 13428 AAACGTGAAATCCGATGAGTTTACCCAATTGTGCCCCGGCGCAATGATTGAATAAGAGTa 13487 ||| ||||| |||||| ||| | |||| ||||||||||||| |||||||||| | Sbjct 10629 TGACGCGAAATACGATGAATTTTCTAAATTATGCCCCGGCGCAACTATTGAATAAGGATG 10570 Query 13488 aaa-aaaTGGCAAATAATCTAGAGTCAAATATTAGTCAAATCGTGTTaaaaaaaTTCTTA 13546 |||||||||| || || || | || | |||||||| || || || || ||| || Sbjct 10569 CTGTAAATGGCAAACAACCTTGACGCTAACGTCAGTCAAATTGTCTTGAAGAAGTTCCTA 10510 Query 13547 CCCGGTTTTATGTCGGATATTGTTTTGTGTAAAACCGTTGACAGACAATTATTATCGGGT 13606 || ||||||||||| ||| | || |||||||||| || || | ||| | || |||| Sbjct 10509 CCGGGTTTTATGTCTGATCTGGTGCTGTGTAAAACGGTCGATCGCCAACTGTTGGCGGGC 10450 Query 13607 GAGATAAATTCAAATACAGGCGACAGTGTGAGCTTTAAGCGTCCGCATCAATTTAAGTCT 13666 || || ||||| || || || || || || |||||||| ||||| || || || || Sbjct 10449 GAAATCAATTCCTCCACGGGTGATAGCGTCAGTTTTAAGCGCCCGCACCAGTTCAAATCA 10390 Query 13667 GAAAGAAC-AGAGACGGGTGACATTACGGGGAAAGATAAAAATGGTCTTTTCTCTGCTAA 13725 ||| | || | |||||| || ||||| || || |||||| | || | || || || Sbjct 10389 GAACGCACGACGGACGGG-GATATTACCGGCAAGTCTAAAAACAGCCTGATTTCAGCCAA 10331 Query 13726 AGCGACAGGCAAAGTGGGTAAATATATCACGGTGGCCGTCGAATGGACACAAATTGAAGA 13785 || || || |||| || || || || ||||| || || || | || |||||||| Sbjct 10330 GGCAACCGGTGAAGTCGGAAATTACATTACGGTCGCTGTTGAGTATCGGCAGATTGAAGA 10271 Query 13786 GGCGCTAAAGCTTAATCAGCTTGATCAAATTTTATCACCCATTCATGAACGCATGGTCAC 13845 |||||||||||| |||||||| || || |||||| | ||||| | ||||| ||||| || Sbjct 10270 GGCGCTAAAGCTCAATCAGCTAGACCAGATTTTAGCCCCCATCAACGAACGTATGGTGAC 10211 Query 13846 TGATTTGGAAACCGAATTAGCCCATTTTATGATGAACAATGGCGCTTTGTCGCTCGGTTC 13905 ||| ||||||||||| | || | ||||||||||| | ||||| | ||||| || Sbjct 10210 GGATCTGGAAACCGAACTGGCGCTGTTTATGATGAAGCACGGCGCACTATCGCTGGGCAG 10151 Query 13906 ACCGAATACAGCGATaaaaaaaTGGGCTGATGTAGCTCAAACCGCTTCATTTATAAAAGA 13965 || || || ||||||| |||||| |||| || || ||||||||||| || | ||||| Sbjct 10150 CCCCAACACGCCGATAAAGAAATGGTCTGACGTGGCGCAAACCGCTTCCTTCCTGAAAGA 10091 Query 13966 TATCGGTATTAAAACAGGCGAGAACTATGCCATCATGGATCCCTGGTCAGCCCAACGGCT 14025 | || || || | || |||||||||||| | |||||||||||| | || || || || Sbjct 10090 CCTGGGCATCAATAGCGGTGAGAACTATGCCGTGATGGATCCCTGGGCGGCGCAGCGTCT 10031 Query 14026 GGCGGATGCGCAATCAGGGTTACATGCTGCGGATCAATTAGTGCGTACAGCCTGGGAGAA 14085 ||| ||||||||||| || |||||||| |||| ||| | ||||| || |||||||| || Sbjct 10030 GGCCGATGCGCAATCCGGATTACATGCGTCGGAACAACTGGTGCGCACCGCCTGGGATAA 9971 Query 14086 TGCGCAGATATCAGGTAATTTCGGGGGCATTCGTGCATTGATGTCTAATGGGTTGGCCTC 14145 ||| |||||||| || || ||||| || || || ||| ||||||| || || || || || Sbjct 9970 TGCCCAGATATCCGGCAACTTCGGCGGAATACGCGCACTGATGTCAAACGGTTTAGCGTC 9911 Query 14146 GAGAAAACAAGGTGATTTTGACGG--AGCCATCACGGTTAAAACCGCCCCTAACGTTGAT 14203 | | || || ||||| | ||| ||| ||| ||| ||| | ||||| | || | Sbjct 9910 ACGGACGCAGGGGGATTTCGGCGGCAAGC--TCAAGGTGAAAGCGGCCCCGCAGGTGAAC 9853 Query 14204 TATCTGTCGGTTAAGGATTCCTATCAATTTACGGTAGCATTGACCGGCGCCACCCCGAGT 14263 || | ||| |||||| |||| ||||| || | || | ||||| || | ||| Sbjct 9852 TACGAGAAGGTCAAGGATAGCTATGCGTTTACCGTGACGTTAAGTGGCGCTACTGCCAGT 9793 Query 14264 AAAACAGGCTTCCTAAAAGCCGGTGATCAACTTAAATTC-ACGTCTACTCATTGGTTAAA 14322 ||| ||||||| || |||| || || || ||| | || ||| | || || ||| | || Sbjct 9792 AAAGCAGGCTTTCTGAAAGTGGGCGACCAGCTTCAGTTTGACG-CGACACACTGGCTTAA 9734 Query 14323 TCAGCAAAGCAAACAAACATTATATAATGGATCAACAGCGATGAGTTTTACGGCAACGGT 14382 |||||||||||||| || | ||||| || | | || || |||||||| || || || Sbjct 9733 CCAGCAAAGCAAACAGACGCTGTATAACGGTGCGTCCGCTATCAGTTTTACCGCGACCGT 9674 Query 14383 GCTGGAAGAGACTAACTCTACCGCTTCGGGTGATGTCACTGTCAAATTATCTGGTGTTCC 14442 ||||| ||| |||| | || || || | || ||| | ||||| || || Sbjct 9673 ACTGGAGGAGGTGGACTCCAGTGCAGAAGGGGAATTGACGGTCTCGCTCTCTGGCGTACC 9614 Query 14443 GATTTATGATGaaaaaaaTTCTCAATACAATGCCGTTGAT-GCAAAAGTTAAG---GCAG 14498 |||| |||| | || | |||||||| || || ||| || ||| | |||| Sbjct 9613 TATTTTTGATACCACCCATCCGCAATACAACGCGGTCGATCGC----GTTTTGGGCGCAG 9558 Query 14499 GAGATGCAGTTTCTATCATAGGAACGGCTAAACAACAGATGAAACCTAATCTTTTCTACA 14558 | ||| | || | | | || || || || || ||||| || || || ||||||| Sbjct 9557 GGGATACGGTGACGGTTGTTGGTACCGCCAAGCAGGCCATGAAGCCGAACCTGTTCTACA 9498 Query 14559 ATAAGTTTTTCTGTGGGCTTGGGACCATCCCCTTGCCAAAATTGCATAGCCTTGACTCCG 14618 | || | ||||| || | || ||||| ||||| || || | || ||| | || || | Sbjct 9497 ACAAACTGTTCTGCGGATTGGGCACCATACCCTTACCCAAGCTACACAGCATCGATTCGG 9438 Query 14619 CCGTGGCAACGTATGAAGGGTTTTCTATTCGTGTACACAAATATGCGGATGGTGACGCAA 14678 | || || || |||||||| || |||||||| ||||| ||||| || || |||||||| | Sbjct 9437 CGGTCGCTACCTATGAAGGCTTCTCTATTCGCGTACATAAATACGCCGACGGTGACGCCA 9378 Query 14679 ACAAGCAGATGATGCGTTTTGACCTGTTGCCTGCTTATGTCTGCTTTAATCCGCATATGG 14738 |||||||||||||||| || |||||| ||||||| ||||| |||| || |||||||||| Sbjct 9377 ACAAGCAGATGATGCGCTTCGACCTGCTGCCTGCATATGTTTGCTACAACCCGCATATGG 9318 Query 14739 GTGGTCAATTCTTTGGTAATCCTTAAA 14765 | ||||| || || |||||||| |||| Sbjct 9317 GCGGTCAGTTTTTCGGTAATCCGTAAA 9291 Score = 780 bits (864), Expect = 0.0 Identities = 1276/1816 (70%), Gaps = 33/1816 (2%) Strand=Plus/Minus Query 10347 GTCCCCTCATCGTCAAGTTGGTCA-TGATGGCTGAAACATTACAAAAAAGACATGAACAA 10405 || || || || || ||||||| | | ||||||||| || |||||| ||||| | Sbjct 13572 GTTCCTTCCTCCTCCAGTTGGTAAATTATGGCTGAATCAAGACAAAAGCAGCATGAGCGC 13513 Query 10406 ATTATGCGCAAGTTTGACCGAGCGCACTCCCCGCAGGAAGCGGTGAGAGAAAAATGTCTC 10465 | |||| || ||||||||| || || |||||| | | |||| | || || || | Sbjct 13512 GTCATGCTCAGGTTTGACCGTGCCTGGTCACCGCAGCAGGTGGTGCGCGAGAAGTGCATT 13453 Query 10466 GAGGCGACAAGATTTGCGCGCGTCCCGGGTGGGCAATGGGAAGGGGCAACGGCGGCGGGC 10525 || || || | |||| ||| || || || ||||||||| ||||||| || | |||||| Sbjct 13452 GAAGCAACCCGCTTTGTGCGGGTGCCCGGCGGGCAATGGAAAGGGGCTACCGTGGCGGGA 13393 Query 10526 TCTGAATTAGGCAAACATTTTGAGAAGTATCCGAAGTTTGAAATTAATAAAATATCGACC 10585 | | | | | || ||||| || || || ||||||||||| || ||| | | || Sbjct 13392 ACCAAGCTGGATGACCAGTTTGAAAAATACCCCAAGTTTGAAATCAACAAAGTCGCTACA 13333 Query 10586 GAGCTTAATCGGATAATCAGCGAATATCGCCATAATCGGATTACGGTTAAGTTTAGGCCC 10645 ||||||||||| || ||||||||||| ||| | || || || | || || ||| | || Sbjct 13332 GAGCTTAATCGCATTATCAGCGAATACCGCAACAACCGCATCAGTGTGAAATTTCGCCCA 13273 Query 10646 GGCGATAAGACCGCCAGCGAAGCGTTAGCCAATAAATTAAATGGCCTGTTCCGCGCAGAC 10705 ||||| || ||||||| || | | | ||||||||| | |||| ||||| || || || Sbjct 13272 GGCGACAATGCCGCCAGTGAGGAGCTGGCCAATAAACTCAATGAGCTGTTTCGGGCGGAT 13213 Query 10706 TACGAAGAAACGGATGGCGGCGAAGCGTGCGATAACGCTTTTGATGACGGCTCAACCGGG 10765 || |||||||| |||||||||||||| || |||||||| |||||||| | ||||||| Sbjct 13212 TATGAAGAAACCGATGGCGGCGAAGCCTGTGATAACGCCTTTGATGATGCGGCAACCGGT 13153 Query 10766 GGGTTTGGTTGCTTCAGGCTGACGACAAATTTAGTCAATGCGCTTGATCCGATGGATGAG 10825 || ||||| ||||| | ||||| || ||| ||||||| ||| || ||||||||| Sbjct 13152 GGATTTGGCTGCTTTCGCCTGACCACGTCTTTTGTCAATGAATATGACCCCATGGATGAG 13093 Query 10826 AGACAACGTATTTGCCTCGAGCCAATATACGACCCCGCCCGCTCTGTTTGGTTCGATCCT 10885 | ||||| ||| | | || || |||||||| || ||||| || || |||||||| || Sbjct 13092 CGGCAACGGATTGCCGTTGAACCGATATACGATCCGGCCCGTTCAGTCTGGTTCGACCCC 13033 Query 10886 GATGCGAAGAAATATGATAAATCTGACGCAGAATGGGCTTTTTGCATGTACTCACTCTCT 10945 ||||| || ||||| |||||||| ||||| ||||| || ||||||||||| |||| Sbjct 13032 GATGCCAAAAAATACGATAAATCCGACGCGCTTTGGGCGTTCTGCATGTACTCCGTCTCC 12973 Query 10946 GCTGAAAAGTATAAGGCGGAATACAACAAAGACCCGGCAACGTTAATGAGCGGCATTGAA 11005 | ||||| || |||| || ||| |||||| ||| || | | ||| || | Sbjct 12972 CCGGAAAAATACCAGGCCGAGTACGACAAAGCGCCGACATCCCT--TGATAGGGTGGGGC 12915 Query 11006 CG--ATCATGGGATTATGATTGG--TACGATGTTGATGTGGTTTATATCGCAAAATACTA 11061 || || ||| | || || ||| |||| ||||||||||| ||||| || ||||| Sbjct 12914 CGGTGTCGTGGCAATACGACTGGTTTACG--CCCGATGTGGTTTACATCGCCAAGTACTA 12857 Query 11062 CGAAGTaaaaaaaGAGTCGGTGGATGTGGTGAGTTTTCAAAACCCATTGACAAGTGAAAC 11121 ||| || || || || || ||||| | |||| || | || |||| |||| Sbjct 12856 CGAGGTGCGCAAGGAATCCGTCGATGTCATCAGTTATCGCCAGCCGCTGACGCAAGAAAT 12797 Query 11122 CGTCACCTATGACAGTGATCAGCTTGAACTCGTCGAGGATGAGCT--GGCAGACATCGGG 11179 | |||||| ||||| || ||| | | | ||||||| || |||||| ||| Sbjct 12796 TGCCACCTACGACAGCGAGCAGATCGCCGATATTCAGGATGAACTCGAGCAGAC--CGGA 12739 Query 11180 TTCATTGAGG----CGGCACGGCGAACCATTAAGCGCCGGCGGGTTTATGTCTCCGTGGT 11235 | |||| | ||| ||| || | ||||| ||||| |||| || | ||||| Sbjct 12738 T---TTGAAGAAATCGG-ACGCCGTTTTGTCAAGCGTCGGCGCATTTACGTTGCGGTGGT 12683 Query 11236 GGATGGTGAGGGCTTCCTTGAGAAAGCGCA-ACGAATACCCGGTGAGCATATCCCGTTAA 11294 ||| ||||| ||||| ||||| ||||| || ||| || ||||| |||||||||||| | | Sbjct 12682 GGACGGTGACGGCTTTCTTGA-AAAGCCCAGACGCATTCCCGGCGAGCATATCCCGCTCA 12624 Query 11295 TTCCGGTCTATGGTAAGCGGTGGTTTATCGATGATATTGAGCGAGTCGAAGGTCACATAG 11354 | || || || |||||||| ||||||||||||||| | || || || || || || || | Sbjct 12623 TCCCCGTTTACGGTAAGCGCTGGTTTATCGATGATGTCGAACGGGTAGAGGGGCATATCG 12564 Query 11355 CAAAAGCCATGGATGCCCAACGTCTGTATAACTTACAGGTGTCGATGCTGGCAGATTCGG 11414 | || | |||||| | || ||||| || || | |||||||| |||||||| ||| | | Sbjct 12563 CCAAGGTGATGGATCCACATCGTCTCTACAATCTTCAGGTGTCCATGCTGGCGGATGCCG 12504 Query 11415 CCACACAGGATACCGGTTCA-ATTCCGATTGTCGGTAAGAGTCAGATAAAAACCCTGGAG 11473 || |||| ||| |||| ||| | |||||||| | || | ||||| ||| |||||| Sbjct 12503 CCGCACAAGAT-CCGGGTCAGACCCCGATTGTGGATATGGCGCAGATTAAAGGACTGGAG 12445 Query 11474 AAATATTGGGCGAATCGAAATAAAAATAGGCCGG-CTTTCTTGCC--ACTCAATGAGATT 11530 | | |||| | || || || || |||| ||||||| || | || | || Sbjct 12444 CAGCACTGGGAGGGACGTAACCGGAAAAGACCGGCCTTTCTTCCCTTGCGCACAGTGACC 12385 Query 11531 GTTGACAAGCAAGGTAATATTATTGCGCCCCCGACGCCAGTCGGATACACGCAA-CCCCA 11589 | | | ||| || ||| | | || || | | | || || |||||| | || Sbjct 12384 GAT-AAAAG--TGGCAATGTCGTCGCCCCGGCCAATGTTGCAGGGTATACGCAAGCGCCC 12328 Query 11590 GCCACTGAATCAGGCGATGGCGGCGTTATTACAGCAAACGGGGGCGGATATTCAAGAAGT 11649 | | |||||||||||| | || || || ||||||||||| | || ||||| || || || Sbjct 12327 GTC-CTGAATCAGGCGCTTGCCGCCTTGTTACAGCAAACTAGCGCAGATATCCAGGAGGT 12269 Query 11650 CACCGGTTCAAGCCAGGCGATGCAGCCAATGCCCAGCAATATAGCCAAAGAAACGGTTAA 11709 || || || ||||| ||||||| ||||| || || | || |||||||| || Sbjct 12268 GACTGGAAGCAGTCAGGCCATGCAGCTGATGCCGAGTAACGTGGCGCGCGAAACGGTGAA 12209 Query 11710 TCATCTGATGCATCGTTCCGATATGTCCTCGTTTATTTATCTTGACAATATGGCGAAGAG 11769 |||| | ||||||| |||||| | |||||||| || || ||||| ||||| || || Sbjct 12208 CAGTCTGCTTAATCGTTCGGATATGGCGTCGTTTATCTACCTCGACAACATGGCCAAAAG 12149 Query 11770 CCTTAAGCGCGCGGGTGAAGTTTGGTTATCGATGGCCCGTGAAGTCTACGGCTCGGATAG 11829 ||| || || ||||||||| | ||| | || |||||||| ||| ||||||| || ||| | Sbjct 12148 CCTGAAACGGGCGGGTGAAATCTGGCTCTCTATGGCCCGCGAAATCTACGGATCCGATCG 12089 Query 11830 ACAGGTTCGTATTGTTAATGCGGACGGCACTGACGATATCGCCTTAATGTCGGTGGTCAT 11889 |||| || |||| | || ||||| |||||||||||||| | ||| | | ||| Sbjct 12088 CGAGGTGCGCATTGCTCATAAAGACGGTACTGACGATATCGCGCTGATGAATGCCGCCAT 12029 Query 11890 CAATGATAATCAGACCGGGCAAGTCGTCGCGATGAATGACTTATCCAGTGGGCGTTATGA 11949 ||||||||||| || | || || || |||||||| | || | ||||| ||||| Sbjct 12028 TCTCGATAATCAGACTGGCCGGGTTGTGGCCCTGAATGACCTGTCAATCGGGCGCTATGA 11969 Query 11950 TGTCACGGTCGATGTGGGGCCGTCTTATACCGCAAGACGGGATGCGACGGTTTCAGTGCT 12009 |||| |||| |||||||| || |||| ||| | ||||| ||||| ||| | | Sbjct 11968 TGTCTCGGTGGATGTGGGACCCAGCTATAGCGCCCGCCGGGACGCGACCGTTAACGCCTT 11909 Query 12010 GACCAATCTGTTGGCGGGCATGTTACCGCAAGACCCAATGCGACAGGTTTTACAAGGTAT 12069 || | | ||| |||||||||||||||||| || ||||| | | || || || Sbjct 11908 AACGCAGTTATTGCAGGGCATGTTACCGCAAGATCCGATGCGCCCAGCGTTGATGGGCAT 11849 Query 12070 CATTCTGGATAATATGGAGGGTGAAGGACTCGACGAGTTTAAGGAATATAACCGTAAACA 12129 ||| | ||||| ||||| || |||||||| || || ||||||| | ||| ||| || Sbjct 11848 CATCATCGATAACATGGAAGGAGAAGGACTGGATGACTTTAAGGCGTTTAATCGTCGCCA 11789 Query 12130 GTTATTAACGCAGGGC 12145 |||| | || |||||| Sbjct 11788 GTTACTGACTCAGGGC 11773 Score = 233 bits (258), Expect = 4e-57 Identities = 1021/1586 (64%), Gaps = 51/1586 (3%) Strand=Plus/Minus Query 15492 GCCGATTATATTGATGCCTTACCTGTAAATATGTTAGCCACACCCAAAGAAGTCCTGAAT 15551 ||||||||||| || ||||| || || |||||| | || || ||||| || ||||| Sbjct 8476 GCCGATTATATCGACGCCTTGCCGGTCAATATGCTGGCTACGCCCAAGCCGGTATTGAAT 8417 Query 15552 GCCTCGGGTTATTTACGCTCTTTCCCTGGCATTGAGAA-AAAGCAG--GACGCAAAGGGT 15608 ||| |||||| ||||||| || || || |||| ||||||| | ||| |||| Sbjct 8416 GCCAGCGGTTATCTACGCTCGTTTCCCGGTATTGCCCGCAAAGCAGAGGTCGCCG-GGGT 8358 Query 15609 GTTTCACGGGGTGTCCATTTTAATACCAAAAATAACGCGCTCTATCG-GGTCTGTGGCAA 15667 || | || || || || | |||||| | | || || | ||||| || ||| || || Sbjct 8357 GT--CCCGAGGCGTTCAGTACAATACCCATGAAAAGACGGTTTATCGCGGGCTG-GGAAA 8301 Query 15668 TACACTTTATCGTAATGACAAAGAAG--TTGCTGATATAGCTGGAATGAGCCGAGTATCT 15725 | | |||| || | || | | | || ||||| ||||||| | | || | Sbjct 8300 TCAA--TTATACAAAGGCCATAAACCGATAGCGGATATTGCTGGAAAGGGTCGCATCAGC 8243 Query 15726 ATGTC--TCACTCGAGTCATAGTCAGGCGATTTGTTTTGAAGGTAAAGTAAAGTTATATA 15783 ||| | | | || || |||||||| | | ||| ||| | | | | || Sbjct 8242 ATGGCGTTTAGCCGCAACA--GTCAGGCGGTAGCAGCGGCAGGAAAAATGACGCTCTACC 8185 Query 15784 GATATGACGGTACCGAGAAGGCATTATCAAACTGGCCAAAGGATAAA---TACCCTCAAT 15840 | || || || || | || || | ||||||||| || || ||| ||| | |||| Sbjct 8184 GTTACGATGGCACGGTAAAAACACTGGAAAACTGGCCGAAAGACAAAAAATACACGCAAT 8125 Query 15841 ATGATTTAGGTGAAGTGATTGATGTTTGTCGAAATCGGGGGCGTTACATCTGGTTACAAA 15900 | ||| | ||| ||| ||| | || | || || ||||| |||||| || Sbjct 8124 ACGATATTGGTACCGTGCGGGATATGTGCCATTTGCGCGGACGTTATGTCTGGTGTAAAG 8065 Query 15901 AAGGGGGTGAACGATTTGGCGTAACTGATTTGGAAGATGAATCCAAACCGGATAGATATC 15960 | || || ||||| || || ||||||||||||||||| | || || | || | Sbjct 8064 ACGGCACCGATATTTTTGGTGTCACCGATTTGGAAGATGAATCTCACCCTGACCGCTACC 8005 Query 15961 AGCCTTTTTATCGCGCTGAATCTCAGCCCGATGGCATCGTTTCCGTC--GACGCATGGCG 16018 | | |||||||| ||||| || ||||| ||||| | || || || ||||| Sbjct 8004 GCGCGCTGTATCGCGCCGAATCACAACCCGACGGCAT--TATCGGTATTGATAGCTGGCG 7947 Query 16019 AGACCTGATTGTTTGTTTTGGGTCGTCAAGTATCGAGTATTTTACCTTAACCGGATCGGC 16078 || | ||||| || ||||| |||| | || || |||||| || | ||||| |||| Sbjct 7946 CGATTTTATTGTCTGCTTTGGCGCGTCCACCATTGAATATTTTTCCCTGACCGGGGCGGC 7887 Query 16079 GGATACATCCCAACCGCTTTATATTCATCA-AGCC-GCTTATATGATCCAAGCGGGTATT 16136 || | | | |||| | ||| | || |||| || ||| || | || ||| Sbjct 7886 CGA--CGGGCAATCCGCCATCTATGCCGCACAGCCTGCACTCATGGTCGAGAAAGGCATT 7829 Query 16137 GCCGGTCGTGATTGCAAATGTCG--TTATCAAGACAAATACGCCATCTTGAGCCATCAAT 16194 ||||| | ||||| || | | | | || | ||| | |||||||| Sbjct 7828 GCCGGGACCCACTGCAAGACCCGGCTCGGCGATGCTCATGTG--ATCATCAGCCATCAGG 7771 Query 16195 CGACCGGGCAACCGGCGGTTTATCTCATC-----GGCGCAGGTGaaaaaaaCAAAATATC 16249 | ||||| ||| |||| || || || |||||||| || | | | | Sbjct 7770 CCACCGGCGCGCCGTCGGTATACCTGATTAATCAGGCGCAGGCGACATCGA-----TTGC 7716 Query 16250 TACCGCGACCATCGATAAAATTATCCGTTATTATTCTGCGGATGAATTAGCGGCTTCCTT 16309 || || |||||||| |||||| | || || | |||||| | ||| || | Sbjct 7715 CACGGCCACCATCGAGAAAATTCTACGCAGCTACACACACGATGAACTGGCGAGCGCCGT 7656 Query 16310 TATGGAGTCGATTCGATTTGACAACCATGAATTATTACTCCTTCACCTGCCCAAACACAC 16369 ||||| | | || || |||| ||| |||||| | || | || |||| ||| Sbjct 7655 CATGGAAACCGTCCGTTTCGACAGCCACGAATTAGTGCTTATCCATTTGCCGCGACAGGT 7596 Query 16370 CCTTTGTTTTGATGGCTCAGCAAGCCATCAATATTCGCAATGGTCATTACTGAAAAGCGG 16429 | |||| ||| | | | || | ||| | |||||||| | ||||||| || Sbjct 7595 GTTGTGTTATGACGCCGCGGCCAACCAGAACGGGCCGCAATGGAGCCTGCTGAAAACGGG 7536 Query 16430 ATTTTATGATGAGCCTTATCGGGCGATTGATTTTATGTTTTTTGACAATCAAATCACCGT 16489 |||||| | | || ||||| | || |||||||||||| ||| |||| ||||| Sbjct 7535 CTTTTATCACGCTCCCTATCGCGGCATCGATTTTATGTTTGCCGACCATCACCTCACCTG 7476 Query 16490 GGGTGATAAGAAAGAAGGCGTGCTCGGTCAT-TTAATTTTCAATGCGTCAAATCAATATG 16548 || ||||| | || | | | ||||| || || ||||| || | || ||||||| Sbjct 7475 TGGCGATAAACACGATGCCCTCCTCGGCCAACTTGATTTTGCAT-CTTCTGCGCAATATG 7417 Query 16549 AACAGCAGACTGAACACCTTCTTTATACCCCGATGATAAAAGCGGATAATGCCCGATTAT 16608 || | | | || || |||| ||||||||| | | || || ||||||||||| ||| Sbjct 7416 AAAAACCGCAGGAGCATGTTCTCTATACCCCGCTTTTCAAGGCAGATAATGCCCGCGTAT 7357 Query 16609 TTGATTTTGAACTGGAAGCTTCAACGGGTGTTGCTCAAATCGCGGATAAGTTATTTCTGT 16668 |||||||||||||||| || ||||| || || || || ||||| || | || || | Sbjct 7356 TTGATTTTGAACTGGAGGCATCAACCGGCGTGGCGCACATCGCCGACCGCCTCTTCCTCT 7297 Query 16669 CTGTCACAACAGACGGCATTAATTACAGCAGAGAACAACTAATAGAACAAAATTCCCCTT 16728 | | ||| | |||||||| ||| || | ||||| | || | |||||| | || | Sbjct 7296 CCGCCACCGCCGACGGCATGCATTTTGGCCGCGAACAGATGATTAACCAAAATGCGCCGT 7237 Query 16729 TTCAGTATGACAAACGCATTCTCTGGCGACGGATTGGACGCGTGAGAAAAAATATCGGCT 16788 || ||||||| | || ||||||||||| ||| |||| | | ||||||||| |||||| Sbjct 7236 TTGCGTATGACCAGCGAATTCTCTGGCGGCGGGTTGGCTACATCAGAAAAAATGTCGGCT 7177 Query 16789 TTAAAATCCGTATCATCACTAAATCACCGGTGACCTTATCCGATTTGTCA-ATCAGGATG 16847 ||||| | || | ||||| ||| || ||||| | |||| || |||| || |||||| Sbjct 7176 TTAAAGTACGGGTGATCACCTCATCGCCCGTGACGCTCTCCGGTT-GTCAGATAAGGATG 7118 Query 16848 GAATAATG--AACCGACGTAATGCGGATAACCCGGTTGAGCTTCAGGTCACGCACATTGA 16905 |||||||| || ||| || | |||| || || || | || ||||| | |||| Sbjct 7117 GAATAATGGCAAACGA--TACGCCAAATAATCCCGTGGAAATACACACCACGCGCCTTGA 7060 Query 16906 CCCAACGATTTTACCCGCTAATTTTTCGACCGCCTACCGCATGATTGT-CTTAAACAATT 16964 | | | || || || |||||| ||||| |||||| ||| ||||| || Sbjct 7059 TACCATCCTGTTGCCGGCGAATTTTGGCTTTGCCTATCGCATGTATGTGCTTAATCAGGG 7000 Query 16965 TATCGGATATGGGTAGAGTGGCCGGTAAAGCCAATGAAGCGGCGGACGATGCCTATCAGT 17024 || ||| |||| | ||||||| |||||||| ||| | | | |||||| | Sbjct 6999 CAT-GGAGTTGGGCAAGGTGGCCGTCAAAGCCAACGAATCCAGCCAGGCCGCCTATGACG 6941 Query 17025 CGAAAACAAGAAATGATGAGCAAGAT 17050 | |||| | ||||| |||||||| Sbjct 6940 CCAAAAATCGCAATGACCAGCAAGAT 6915 >seq724 Length=1463 Score = 342 bits (378), Expect = 1e-89 Identities = 303/374 (81%), Gaps = 11/374 (3%) Strand=Plus/Minus Query 27926 GCCTTAGCAAGCACGCTAGACGTAAACCAAATCTGCCCATTATGAGATATGGTTTCAAGA 27985 || |||||||| || |||| || ||||| |||||||| || || | |||||||||||| Sbjct 1463 GCTTTAGCAAGTTCGGTAGAGGTGAACCAGATCTGCCCGTTGTGGGGAATGGTTTCAAGA 1404 Query 27986 ACAGTATTGCGGAAAACTAAAGTAGTCATAGTAATGATTTCCTTGTTAGTTAAGGATAAT 28045 || || || ||||| | ||| || |||||||||||||||||||||||||||||||| || Sbjct 1403 ACGGTGTTACGGAACATTAAGGTTGTCATAGTAATGATTTCCTTGTTAGTTAAGGAACAT 1344 Query 28046 CACCACCTTTGAGGTCTCAAACTCATATTGGCGGTGAACTGAACAGGGTTGAGACTACCG 28105 ||||||||| |||| |||| || | || ||||| ||| | | |||| ||||| Sbjct 1343 CACCACCTTCGAGG--TCAATCT----TGGGTGGTGAGCTGGATGAGTTTGACCTTACCG 1290 Query 28106 GCTAACAAGGACCCAGCGAGCCTTTCGGCTCCCCCATCCAGCCCACCATTGATTTTTGAT 28165 |||||||||||||| | ||||||| ||||||||||||||||||||||||| || |||| Sbjct 1289 GCTAACAAGGACCCGGTGAGCCTTGCGGCTCCCCCATCCAGCCCACCATT--ATTCTGAT 1232 Query 28166 ATGGCAGCCTGACGCATaaaaaaaaCACGCTTACTGCGTGCTATGCGCCTTGTTAGCTAA 28225 ||||| | ||||||||| |||||||||||| | ||||| ||||||||||||||| | | Sbjct 1231 ATGGCGGACTGACGCAT--AAAAAACACGCTCTCGGCGTGTTATGCGCCTTGTTAG-TTA 1175 Query 28226 TACGGGGTCTCAAACCCGACACCTGATTTTGCAGATGCAAATAAACTATAGCGCATGATT 28285 | |||| |||| |||||||||||| ||||||| |||| || ||||||||||||| | Sbjct 1174 TCCGGGAGGTCAATCCCGACACCTGAATTTGCAGGTGCAGATTGACTATAGCGCATGGAT 1115 Query 28286 TCTTCTTTCGTCAA 28299 | ||||| |||||| Sbjct 1114 TATTCTTCCGTCAA 1101 >seq813 Length=1717 Score = 203 bits (224), Expect = 8e-48 Identities = 308/436 (71%), Gaps = 3/436 (1%) Strand=Plus/Minus Query 25031 TTATTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTGCCCGTTTTGAATTGCGTCG 25090 || ||||| |||||||| || | ||| | ||||| | || ||||| | |||||| Sbjct 488 TTTTTTCCGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCG 429 Query 25091 TTCCATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAATAAAGACAGGGCG 25150 |||||||||| |||||||| |||||| |||| || || ||||| || || || ||||| Sbjct 428 CTCCATGACCAGTTCATCGACGGTATCGGTAGCGACAATGTGGTGGATGAATACCGGGCG 369 Query 25151 GTTATGTCCGGCTTGTGCCTGACGAGTCGGGCCTATACGTTCGATAATTTGCTGGTACTG 25210 || || || |||||||| || || |||| || || |||||||| ||||||||||| Sbjct 368 CGGGTGCCCTGCCTGTGCCTGCCGGGTAGGGCTGATGCGCTCGATAATCTGCTGGTACTG 309 Query 25211 CTCTAAATCCCACCAGTGGGaaaaaaaGACCAGAATATTACCGCCGTCCTGTAAATTTAA 25270 ||| | |||| ||||| || ||||| ||| | ||||||||||||||| | || | Sbjct 308 CTCAAGTCCCCATCAGTGCGAGAAAAACACC--ACCATTACCGCCGTCCTGAAGGTTCAG 251 Query 25271 GCCGTGTCCACAGCTTGCGGGGTGAGCAAAGAGCAAGGGGATTTTGCCATTATTCCAGTC 25330 ||||| || ||| || ||||| || || || | || || || |||||||| Sbjct 250 CCCGTGCCCGGCGCTGGCAGGGTGCGCGAACAGTAGCGGTATCCGTCCGGCGTTCCAGTC 191 Query 25331 GGTAAGGGTTCGGGGGTTGGCATCTAAATTTTTTCCTTTGGGAAAGGCTTTTAATAAACG 25390 | | | ||| | || ||||| || | || | | || |||||| || | | ||| Sbjct 190 GCTGATGGTCTGCGGATTGGCGTCCAGATGAAGGACATCGGAAAAGGCGTTAAGCAGACG 131 Query 25391 CTCGAGGTCATGTTTCCAGTGGTAAGCG-ACCAGTACTGGCGTCCCTCCTGATTCATTAA 25449 ||| ||||| || |||||||| || ||| ||||| || || || || || || || | | Sbjct 130 CTCAAGGTCGTGCTTCCAGTGATAGGCGTACCAGCACAGGTGTACCGCCGGACTCGCTGA 71 Query 25450 CAATACTCTCTAGCGC 25465 ||||| || ||||| Sbjct 70 TGATACTTTCCAGCGC 55 >seq439 Length=76666 Score = 95.1 bits (104), Expect = 3e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 8009 CAGCCGCCTGAAACTGGCGAACCAGTCACTGAGTGCCGAACGCGACGCTGCCCGTGCACA 8068 || ||| ||||| | | | ||||| || || ||||| || ||||| |||| ||||| Sbjct 20276 CACCCGTCTGAAGCAGACCAACCAATCGATGGTCGCCGAGCGTGACGCCGCCCACGCACA 20217 Query 8069 GTTTACCCACTATGAGCAGGCGGTTGATATTTTTAACACCATAGCGGGAGCCACGCAGGA 8128 ||||||||||||||| |||||||| | | || ||| ||||| ||||| || ||||| Sbjct 20216 GTTTACCCACTATGAACAGGCGGTAGCGCTGTTCAACCAGATAGCCGGAGCAACACAGGA 20157 Query 8129 TGCACACCAACA 8140 |||||| || || Sbjct 20156 TGCACATCAGCA 20145 >seq568 Length=20147 Score = 86.0 bits (94), Expect = 1e-12 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 28072 ATTGGCGGTGAACTGAACAGGGTTGAGACTACCGGCTAACAAGGACCCAGCGAGCCTTTC 28131 ||||| ||||| | |||||||||| || ||||| || |||| | | |||||||| || Sbjct 8075 ATTGGTGGTGAGCCGAACAGGGTTCTAACAACCGGATA-CAAGTAAACGGCGAGCCTCTC 8017 Query 28132 GGCTCCCCCATCCAGCCCACCATTGAT 28158 ||||||||||||||||||||||| ||| Sbjct 8016 GGCTCCCCCATCCAGCCCACCATAGAT 7990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116752910941332