Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq54 152 4e-32 >seq54 Length=1370671 Score = 152 bits (168), Expect = 4e-32 Identities = 337/502 (67%), Gaps = 14/502 (3%) Strand=Plus/Minus Query 101758 ATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCC 101817 ||| ||||||||| ||||| || | ||| || || ||||| || || || || || Sbjct 1327272 ATGTGCAATCATGTTCGTTAAGAGGGCATACGAGGCTATATTAAAGGGGACACCCAAGCC 1327213 Query 101818 CATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAG---ACATAAAA 101874 |||||| || | |||||| ||||| ||| | | | ||| | | |||||||| Sbjct 1327212 CATATCTGCACTACGTTGATAAAGTTGGCAGCACAATT---CATTATTGGCCACATAAAA 1327156 Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934 |||| || |||||| || || || ||||||| || || ||| |||||||| Sbjct 1327155 TTGAGCCAAGCAATGACAGGGTGGTAAAGCCATTTTTGGTATATCTACCGGATTCCAAGA 1327096 Query 101935 ACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAA 101994 | | | ||| | || ||||||||| ||||| |||| || ||| | | |||||| Sbjct 1327095 GGATAAAATCATACGTCGATCTGTAGGATTTGTCGTTATTGTTCTAATGATGTTTTTTAA 1327036 Query 101995 TTGGTCAACTCCTTC---TCCTTTATAATCGCGCCCAACACCTT-TATATTCTGCTCCGA 102050 |||||| || ||||| || | || ||| | ||| || |||||| ||||| | Sbjct 1327035 TTGGTCGACCCCTTCCGTACCATAATTTTCGTG----ACAAGTTCTATATTGCGCTCCAA 1326980 Query 102051 AATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAAC 102110 |||| | ||||||||| ||||| | ||||| | || ||||| || | |||| ||||| Sbjct 1326979 AATGTCGCCACTGAAAACCATAAATGGGTCCTAAGTCACCTTCTTCGCGATCATTAAAAC 1326920 Query 102111 CAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTG 102170 | | |||| |||||| | | | ||| ||||||| || || | | | Sbjct 1326919 CGCATCTATCCAAAAATTCGCGACTACTATTACCATCCCATATATGGATGTTTTTATTTT 1326860 Query 102171 ATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTC 102230 |||| ||||| ||||| || || |||||||| || || ||||| || ||| | | Sbjct 1326859 GTAGCACTTTGGCATCAGTGCTGCCGCTTATAAACCATAATAGCTCTTCTACTACAGCAC 1326800 Query 102231 TCCAAAATACTCTCTTAGTAGT 102252 |||||||||| | || ||||| Sbjct 1326799 GCCAAAATACTTTTTTCGTAGT 1326778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361243931061401