Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq148 542 3e-149 seq240 444 7e-120 seq184 291 1e-73 seq89 235 7e-57 >seq148 Length=545759 Score = 542 bits (600), Expect = 3e-149 Identities = 1502/2282 (66%), Gaps = 56/2282 (2%) Strand=Plus/Minus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || || | ||| ||||| |||||| |||||| || || || | |||||| ||||| || Sbjct 221666 TTATCGACTGTAAATTGTATGGGATTGGATGCTGGCTTTGTCCTTAGATAATACATACCA 221607 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 ||||| | ||| ||||||| ||||||||||| | | ||| |||||| | Sbjct 221606 GTTTTCAAACCCGCTTTCCATCCATAAAAATGCATGGAGGACAATTTACCATAACTAGCG 221547 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || || ||||| | || | ||||| |||||||||||||| || || | || ||||| Sbjct 221546 TCAGCCATATGTACGTTAAACGATTGGCTTTGATCGATGAAAGCGCCGCGATCGACAGCC 221487 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038 || | || | | ||| ||| ||||||||||| |||||||| | | || || ||| Sbjct 221486 ATGTCAATTGTTGACTTCAGTGAAATTTCCCAAACTGTTTTATATAATTCTTTTATGTCT 221427 Query 53039 TCTGGAAGG--TTTG-TATTCTGAATAGATCCACCATCTACC-ATAATCCTATTCTTGAT 53094 | || | | || | | || || || || |||| || | || ||||| || || || Sbjct 221426 TTAGGTATGGCTTCGATTTTTTGTATTGAACCACGATGTGCCCATAATAAGTTT-TTCAT 221368 Query 53095 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT-T 53153 || ||||||| | || ||| || ||| || |||| | ||| |||| || || | Sbjct 221367 GTCGCCATTCCAAAGATTCAACTCCGTCAAATCTTTAAGCAAATGATGATTGACCACAAT 221308 Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213 ||||| | ||||| ||||| | || || |||| || |||||||| || | || | Sbjct 221307 GAAAT-CACCAGATAATACACGTCGTGTATAAACGTTTGAAGTATACGGCTCAAAGGATT 221249 Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273 | || || || | |||||||||||| ||||| || ||||| || |||||||| ||| || Sbjct 221248 CGTTGTTGCCAAGAATTTGAGCAGTAGATGCCGTAGGCATTGGGGCCACCAACAAAGAAT 221189 Query 53274 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 53333 | | | ||| | || |||| | |||||| |||| |||||| ||||||||| | | Sbjct 221188 TACGCACACCATGATTTTTGATGTCATCTTTAAGAGCCGCCCAATCCCAAAGATCAGTAG 221129 Query 53334 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACA 53389 | ||| |||||||| || ||||| ||| || || Sbjct 221128 GCTTCTTGTTCCACATGTCATATTGAAGAATACCTTTGCTAACTGGGCTAC----CTTCA 221073 Query 53390 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 53449 ||||| ||||| || || | | | || | ||||| || |||||||| ||||||||| Sbjct 221072 TATGTTTCGTACGGGCCATATTGTTTGGCCAACTCACAGCTAGCCTCTAAAGCACCGTAA 221013 Query 53450 TAAATGGTTTCGAAGATCTTCTTATTTA---GATCTTGTGCTTCCAGGCTATCAAATGGA 53506 || ||||||||||| || | | ||||| || | ||| ||| ||| ||||| Sbjct 221012 TATATGGTTTCGAAAATTTGTTGATTTAATAGAACAGCATTTTC---GCTTTCATATGGA 220956 Query 53507 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 53566 ||| | | ||| || ||||| || |||||||| || || ||||| || || | || Sbjct 220955 TAACGCATTAAAATTAATGCGTCAGCAAATCCTTGGACGCCTATACCAATTGGACGGTGA 220896 Query 53567 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 53626 | | |||||| ||| ||||| || | |||||||| ||||| || || ||||| ||| Sbjct 220895 CGCAAATTAGATCTTTTGGCTTCCGGCAACGGATAATAGTTAATGTCAATTATTTTGTTG 220836 Query 53627 AGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATC- 53685 ||||| || || | || || || |||| |||| |||||| ||| | ||| Sbjct 220835 AGGTTCCTTGTTATAAGCTTCGTAACTTCTTTCAATTTGTTAAAATCGTATTTTTTATCC 220776 Query 53686 -TATT-ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCA 53743 || | || |||||||| |||||||| || ||||| || ||||| || | |||| ||| Sbjct 220775 GTAGTCACGAACATGTTTAATGCAATCGAGGCCAGGTTGCAAACTGCAATTTCATCAGCC 220716 Query 53744 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 53803 | |||| | || || || || | |||||| | || || || || | || ||| Sbjct 220715 GAAGTGTATTCGACAATTTCTGTACACAAGTTACTAGATTTTATAGTACCAATGTTCTGT 220656 Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 ||||||||||| || || ||||| || ||||| || | || || ||||| || Sbjct 220655 TGATTACTCTTGCGATTGCAAGCATCTTTGTAAAGCATATAAGGAGTTCCAGTCTCCGCT 220596 Query 53864 TGGGA-TTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT 53922 || || || ||| | || ||| | | ||||||| || ||| | ||| || ||| Sbjct 220595 TGAGACTTGCATATT-GCAAACCACAAGGCACGAGCTTTAATTGT----TTGATTCGCTT 220541 Query 53923 T----TCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCA 53978 | || ||||||||| | || ||| ||||| || ||||||||||| | || Sbjct 220540 TGCCCTCACTTTCGTATTTCATGTATAATTTGTCAAATTCATCTCCCCAAACTTCACACA 220481 Query 53979 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 54038 | |||||||||| || |||||||| | ||||| || || ||||||| |||| ||||| Sbjct 220480 AACCAGGACATTTATGAGGACACATTAGAGACCAATCGCCATCATCCTCTACTCTTTTCA 220421 Query 54039 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTC 54098 | || ||||| || ||||| || || ||| | ||| | | || || || ||| | | Sbjct 220420 TGAACAGATCCGGTATCCATAGGGCATAAAACAAATCGCGTGCTCGATCTTTCTCCTCAC 220361 Query 54099 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 54158 | ||||||||| | ||| || || | | || ||| | ||||| || |||||||| | Sbjct 220360 CAAAATTCTTTTTCAAATCTAGAAATTCGAAAACATCTGCGTGCCAAGGCTCCAAGTACA 220301 Query 54159 TGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 54218 | | | | | || || ||||| || |||||||||| || | || | ||| Sbjct 220300 TAGCAAAAGCACCTGGACGTTTTCCACCACCCTGATCTACATAACGGGCAACACTGTTAA 220241 Query 54219 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT----ATAG 54274 | | | |||||| |||| || ||||| ||| || || || || | || | Sbjct 220240 ACAGACGCAACATAGGAACAAGACCATCCGATACATCACCAGTGCCTGCTATCTTCGTCC 220181 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 ||| || ||||| | || | | | || |||||||||||| || || || ||| Sbjct 220180 CTTTTGCTCGCACGCA-ATGAACATT---TAAACCTATCCCCCCGGCTGACTTGGAAATT 220125 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAG 54393 || ||| | | || | | | || || | | || || || |||| Sbjct 220124 TTAGCACATTGGTCTACAGCCTTCAAAATACCTTTCAAGGAGTCTTCAGGGATCGTTAGC 220065 Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453 ||||| || | |||| ||| |||| ||||| | ||| |||||| || || | ||| Sbjct 220064 AAGAAACAAGAT-GACAATTGTGGACGTATAGTTGCAGCACCAAATAAAGTTGGCGTAGC 220006 Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CC 54512 || ||||| | || || | ||||| || || || ||||| | || || || | Sbjct 220005 ATGAGTAAAATAGCGCTCCGACATAAGATTATATGTTTCAATAGCAGCCTCAATGTCATC 219946 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 | | ||||| || | ||||||||||||| ||| || || || | || | || || Sbjct 219945 ACCG-TGAATACCAATGGCGACACGCATTAGCATATGTTGCGGCCGCTCCGCAATTTTAC 219887 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 | || || | ||| || ||| ||||| |||||||||||||||| | ||||| | Sbjct 219886 CATCAATCTTTAACAAATAAGATCGTTCCAGAGTTTTAAAACCAAAAAAATTGTAATTGA 219827 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--C 54690 |||| || || || ||||| | || || | | ||| || | | | |||| Sbjct 219826 AGTCCCGATCATATATAATGGCCGAATTTAATCGATCAGCATTCTCTCTTATAACATTGT 219767 Query 54691 CATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAA 54750 |||| ||| | ||| ||||| || || | |||| || || | | | Sbjct 219766 AATGG-AATTC-TGATATAATGGGCGACGGGGAATCATT------ATCTACGTTATGATG 219715 Query 54751 TAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 54810 || ||| |||| |||||| || | ||| ||||||||||| |||| ||||||||| || Sbjct 219714 TAGATCACTCATAACTTCAGAGAACACTTTCTTTGTTTCTTTATGTAAATTTGATACCGC 219655 Query 54811 TATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTC 54870 |||| |||||||| ||| |||||||||||||| | | || ||| || ||||| Sbjct 219654 AATTCGAGCGGCTAAAATAGCATAATCCGGATGATCGATGGTCTTGCAGGCGGCAATTTC 219595 Query 54871 GGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTT 54930 ||| | |||| | || | |||| ||| || || || || | ||| | | |||||| Sbjct 219594 GGCCGCCAGATTATCAAGTTCTTGCGTAGTCACACCGGCGTACAATCCGTTAACAACCTT 219535 Query 54931 CATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAAT 54990 || || || ||||||| ||| | | | |||||||| | ||| ||| Sbjct 219534 CAAAGTAATGGCGGCTGGATCTACGAAATCCATATGAAGACCATAACACAGCTTTTGAAT 219475 Query 54991 ACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAA 55050 | || ||||||||||||| ||| ||||||| ||||| ||||| | || || Sbjct 219474 TCTTGACATGATTTTATCAAAATGGACCATTTCCTTACGGCCATTGCGTTTCACCACGAA 219415 Query 55051 CA 55052 || Sbjct 219414 CA 219413 >seq240 Length=301270 Score = 444 bits (492), Expect = 7e-120 Identities = 1474/2259 (65%), Gaps = 60/2259 (3%) Strand=Plus/Minus Query 52835 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 52894 || || | ||| || ||||| || ||||| | ||| |||| || |||||||| ||| Sbjct 294584 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 294525 Query 52895 CTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCG 52954 | | ||| |||||| || || |||| || ||||| | ||||||||||| ||| Sbjct 294524 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 294465 Query 52955 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 53014 |||||||| || | || ||||||| || ||| | | ||| || ||||||||||| Sbjct 294464 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 294405 Query 53015 GTTTTATA-AACTCGCTTAATATCTTCTGGAA--GGTTTG-TATTCTGAATAGATCCACC 53070 |||||||| || || |||| | | ||| || | | |||| | || || || || |||| Sbjct 294404 GTTTTATATAATTCTCTTA-TGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACG 294346 Query 53071 ATCTACCA-TAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTC 53129 || | || |||| || || || || |||||||| | || ||| || ||| || Sbjct 294345 ATTTGACAGTAATAAGTTT-TTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTT 294287 Query 53130 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGAC-AATACTCTCCGAGTGTAAATA 53188 ||| | ||| |||| || || || || ||||| || | | | ||||||| Sbjct 294286 GAAGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTATGTTCT-GTGTAAACG 294228 Query 53189 TTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 53248 || || || || || | ||||| || ||||||| ||||||||||| ||||| | Sbjct 294227 TTTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCA 294168 Query 53249 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 53308 ||||| | |||||||| ||| || | | ||| | || | || | ||||| ||| Sbjct 294167 GGCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGA 294108 Query 53309 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 53368 | |||| | ||||||||| | || ||| ||||| || Sbjct 294107 GCCGCCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCCT 294048 Query 53369 TT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424 || ||||| ||| || ||||||| ||||| || || | | | || | || Sbjct 294047 TTGCTAACTGGGCTAC----CTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTC 293992 Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA---GATC 53481 ||| || |||||||| ||||||||||| || |||||||| || | | ||||| || | Sbjct 293991 ACAGCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAAC 293932 Query 53482 TTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 53541 ||| ||| || |||||||| | | ||| |||||||| || |||||||| Sbjct 293931 AGCATTTTC---GCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTG 293875 Query 53542 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 53601 ||||| ||| | || || | || | | ||||||| ||| | ||| || | ||||| Sbjct 293874 GACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATA 293815 Query 53602 ATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTA-CTTTGACCACATCCTTCA 53660 || ||||| || || ||||| |||||||| | || | ||||| || || |||| Sbjct 293814 GTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTA-ACTTCTTTCA 293756 Query 53661 GTTTGAGAAAATCAAATTGTCCATC--TATT-ACAAACATGTTCAATGCAATAGATGCCA 53717 |||| |||||| ||||| || || | || |||||||| | ||||| || |||| Sbjct 293755 ATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGGCCA 293696 Query 53718 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 53777 | || ||||| || | |||| | | | ||||| | || || || | || |||| Sbjct 293695 GGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACTAAAGTTAC 293636 Query 53778 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 53837 |||| || || || || | || |||||| || || || || ||||| || |||| Sbjct 293635 TACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATCTTTGTAAA 293576 Query 53838 GAATGAATGGCGTACCAGTTTCAATCTGGG-ATTCTATAATCGCTTTCCAGACGACACGA 53896 | || | || | ||||| || || | | | |||| | || ||| | | ||||| Sbjct 293575 GCATATAAGGAGCTCCAGTCTCTTCTTGAGCACTGTATATT-GCGAACCACAAGGCACGA 293517 Query 53897 GCCTTTATTATAGATTTGTATCTCTTT----TCTCTTTCGTATAGTGTATACAATCGTTC 53952 || || ||| | ||| | || |||| || ||||||||| | || ||| || Sbjct 293516 GCTTTAATTGT---TTTAT-TCGCTTTGCCCTCACTTTCGTATTTCATGTATAATTTGTC 293461 Query 53953 AAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 54012 ||| || | ||||||||| | ||| ||||| |||| || |||||||| | ||||| Sbjct 293460 AAATTCATGTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATTAGAGACCA 293401 Query 54013 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA-TA 54071 || || ||| ||| |||| |||||| || ||||| || ||||| || || |||| || Sbjct 293400 ATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC-ATAATGTA 293342 Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131 ||| | | | | |||||| || || |||| | |||| | || || || | | || Sbjct 293341 AATCACGTGGACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAATTCGAAAA 293282 Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191 |||| | |||||| || ||||||||||| | | | | || | ||||| | || | | Sbjct 293281 TATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCTCCCGTCTT 293222 Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251 ||| || || | ||| || || | || |||||||| || | || |||| | |||| Sbjct 293221 GATGTACATAACAGGCGAGATTGTTGAACACGCTCAACATAGGGACAAGACCACTCGATG 293162 Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACC 54309 | ||||| || || || || | | || | || || || | | ||| |||| | Sbjct 293161 CGCCATTAGTACCTGATATCTTTGTACCTTTTGCTCGTATGCAGTGGATATT--TAGAGC 293104 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || ||| |||| | ||||| | || ||| | | || | | | | || || || Sbjct 293103 TACCCCACCTGTCGACTTAGAAACGGCAGCACATTGATATACGGCCTTAAAAATACCATC 293044 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || ||| || ||| | |||| ||| | |||| ||| ||||| | | | Sbjct 293043 AATGGAATCTTCTGGCATCGTTAGTAAGAAATATGATGACAATTGCGGACGAACAATAGC 292984 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 ||| |||||| || | ||||| || |||| | | ||||| | ||||| || || Sbjct 292983 AGCAGCAAATAAAGTTGACGAAGCATGACTAAAATAATGCTCAGACATAAGATTATATGT 292924 Query 54490 CTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548 || ||||| | ||| || || || | ||||| || | ||||||||||||| ||| | Sbjct 292923 TTCAATAGCAGCGTCAATCTCATCACCG-TGAATACCAATGGCGACACGCATTAGCATAT 292865 Query 54549 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTT 54608 | || || | || || || || || |||||| ||| || |||| |||| ||||| Sbjct 292864 GTTGTGGCCGCTCCACAATTTTACCATTAATTTTCCACAAATAAGATTCCTCCAGAGTTT 292805 Query 54609 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTAT 54668 ||||||||||| | |||| ||||| || |||| ||||| | || || | | || Sbjct 292804 TAAAACCAAAAAAAGTGTAATTGAAGTCCCGATCGTGTATAATGGCCGAATTTAATCGAT 292745 Query 54669 CCTTATATTTGTTAACTACAT--CCATGGTAATACTTGAAATAATCGGAGAATGTTTCCC 54726 | || || || | |||| |||| ||| | || | || || || | || Sbjct 292744 CAGCATTGTTTTTTATAACATTGTAATGG-AATTC-CGATACTATGGGCGACGGGGAACC 292687 Query 54727 ATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGT 54786 || || || | | | || || |||| || || ||| | ||| ||||| Sbjct 292686 AT------CATCTACGTTATGATGTAGGTCACTCATAACCTCGGAAAACATTTTCTTTGT 292633 Query 54787 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTG 54846 |||||| |||| ||||||||| || |||| ||| |||| ||| |||||||||||||| | Sbjct 292632 TTCTTTATGTAAATTTGATACCGCAATTCGAGCAGCTAAAATAGCATAATCCGGATGATC 292573 Query 54847 TGTAGTACAAGTGG-CTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTC 54905 || || || | || | || ||| || | ||| | ||||||||| ||| ||||| | Sbjct 292572 GGTGGT-CATGCGGACCGCGGTTTTAGCAGCTAGATTATCCAATTCTTGCGTAGTTACAC 292514 Query 54906 CATTATATATTCC-TTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTG 54964 | | | || ||| | || |||| || || | ||||||| ||| | Sbjct 292513 CGCGGTGCAAGCCGCTGGCT-ACTTTCAAAGTAATGGCGGTCGGATCTACGAAATCCATA 292455 Query 54965 TTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCC 55024 || | |||||||| |||||| || | ||| ||||||||||| || ||| ||||| Sbjct 292454 TTAAGACCATAACACAATTTTAGGATTCTAGAAGTGATTTTATCGAAATGGACCATTTCC 292395 Query 55025 TTGTATCCATTTCGTTTAATGACAAACATTTTTGTTGGT 55063 | |||| ||||| | || |||| || ||||| Sbjct 292394 TCACGGCCATCGCGTTTCACCACGAACAACTTATTTGGT 292356 Score = 201 bits (222), Expect = 1e-46 Identities = 493/735 (67%), Gaps = 17/735 (2%) Strand=Plus/Plus Query 53534 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 53593 |||||||| ||||| ||| | || || | || | | ||||||| ||| | ||| || Sbjct 290648 AATCCTTGGACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGC 290707 Query 53594 ATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTA-CTTTGACCAC 53652 | ||||| || ||||| || || ||||| |||||||| | || | ||||| || Sbjct 290708 AGCGGATAGTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTA-AC 290766 Query 53653 ATCCTTCAGTTTGAGAAAATCAAATTGTCCATC--TATT-ACAAACATGTTCAATGCAAT 53709 || |||| |||| |||||| ||||| || || | || |||||||| | ||||| Sbjct 290767 TTCTTTCAATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAAT 290826 Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769 || |||| || ||||| || | |||| | | | ||||| | || || || | Sbjct 290827 TGAGCCCAGGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACT 290886 Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829 || |||||||| || || || || | || |||||| || || || || ||||| Sbjct 290887 AAAGTTACTACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATC 290946 Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG-ATTCTATAATCGCTTTCCAGA 53888 || ||||| || | || | ||||| | || | | | |||| | || ||| | Sbjct 290947 TTTGTAAAGCATATAAGGAGCTCCAGTCTTTTCTTGAGCACTGTATATT-GCGAACCACA 291005 Query 53889 CGACACGAGCCTTTATTATAGATTTGTATCTCTTT----TCTCTTTCGTATAGTGTATAC 53944 | ||||||| || ||| | ||| | || |||| || ||||||||| | || Sbjct 291006 AGGCACGAGCTTTAATTGT---TTTAT-TCGCTTTGCCCTCACTTTCGTATTTCATGTAT 291061 Query 53945 AATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 54004 ||| ||||| || ||||||||||| | ||| ||||| |||| || |||||||| Sbjct 291062 AATTTGTCAAATTCATCTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATT 291121 Query 54005 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 54064 | ||||| || || ||| ||| |||| |||||| || ||||| || ||||| || || Sbjct 291122 AGAGACCAATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC- 291180 Query 54065 ATAA-ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 54123 |||| || ||| | | | | |||||| || || |||| | |||| | || || || Sbjct 291181 ATAATGTAAATCACGTGCACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAA 291240 Query 54124 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTT 54183 | | |||||| | |||||| || ||||||||||| | | | | || | ||||| | Sbjct 291241 TTCGAAAATATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCT 291300 Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243 || | |||| || || | ||| || || | || ||||| || |||| || ||| Sbjct 291301 CCCGTCTTGATGTACATAACAGGCGAGATTGTTGAACACGCTCAATATAGGAACAAGACC 291360 Query 54244 ATTGGATGCACCATT 54258 ||| ||||| ||||| Sbjct 291361 ATTCGATGCGCCATT 291375 >seq184 Length=525875 Score = 291 bits (322), Expect = 1e-73 Identities = 499/720 (69%), Gaps = 3/720 (0%) Strand=Plus/Minus Query 23950 CCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 ||||||| | | ||| | ||| || ||| | || || ||| ||| ||||| || Sbjct 28985 CCAATTCTAATAGCAAACGATCCGCTACATATTCTATGTATTGACACATACTTTCATTAT 28926 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 |||| || || | || ||||| ||||| | || |||||||| | |||||| || | Sbjct 28925 TCATACCGATTAAATTGACTGGTAGAGCTTCTGTCAGAAATTCCTTTTCAATTTTAACGG 28866 Query 24070 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 24129 | || ||||| || || ||||| ||||| | | |||| |||||||| Sbjct 28865 CATCGGTTATTATTTCCAATATGCGTTCTTTGGTCGGTTTTTGTATCAAATATTTAAACA 28806 Query 24130 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 24189 | ||| || || ||||| |||| ||| || || | |||||||| || ||||| | Sbjct 28805 TTAAAACCGCAAATTCGCAATGTAAACCTTCATCGCGTGATATTAATTCATTAGAAAATG 28746 Query 24190 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 24249 | || || ||||||| ||||| || |||||||||||||| || ||||| |||| || Sbjct 28745 TTAGACCCGGCATTATTCCACGTTTCTTAAGCCAAAATATCGAAGCAAAACTTCCACTAA 28686 Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAAC-CGGCGCTGTC- 24307 |||| || ||||| || || ||||| || || | | || ||| || || || | Sbjct 28685 AGAATATACCTTCGACGGCAGCAAAAGCTATGACACGCTCACCAAAATTCGCCGAACGCG 28626 Query 24308 ATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 24366 ||| |||||| | |||||| || || |||||||| || | ||||| ||||| || | Sbjct 28625 ATGATATCCAAGCTAAAGCCCATTCCGCTTTCTTTTTAACTAACGGCATCGTCTCAATGG 28566 Query 24367 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 24426 ||||||| ||||| | ||| || |||| | | |||| ||||| | | ||||| Sbjct 28565 CATTAAAAAGATAATCGCGTTCTTTCGGATCTGCGATAAATGTTTCAATAAGTAAACTAT 28506 Query 24427 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 24486 |||||||||| || | ||||| ||||| |||||||| || || || || | ||| |||| Sbjct 28505 ACATTTCCGAGTGTACATTTTCGATGGCTATTTGAAAACCATAAAAGCAACGAGCTTCGG 28446 Query 24487 TAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 24546 | | || |||||| | |||| ||||| ||||||| ||||| || || |||||| | Sbjct 28445 TTACTTGAACTTCTTGAGAAAAACGTTCCACTAAATTCTCATTAACAATGCCGTCAGATG 28386 Query 24547 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCC 24606 | |||||||| ||||| |||||| ||||||| ||| || |||| | | || Sbjct 28385 CCGCAAAAAAAGCCAAAACATGTGAAATAAAATGACGTTCATCATCAGTTAATCGCTCCC 28326 Query 24607 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666 ||| || | |||| || | ||| || |||||| | |||||||| || || || |||| Sbjct 28325 AATGATCAAGATCTGCAGCGAGATCAACCTCTTCCGCCGTCCAAAAAGAAGCTTCAGCCT 28266 >seq89 Length=807233 Score = 235 bits (260), Expect = 7e-57 Identities = 671/1019 (66%), Gaps = 28/1019 (3%) Strand=Plus/Plus Query 52835 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 52894 || || | ||| || ||||| || ||||| | ||| |||| || |||||||| ||| Sbjct 806226 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 806285 Query 52895 CTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCG 52954 | | ||| |||||| || || |||| || ||||| | ||||||||||| ||| Sbjct 806286 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 806345 Query 52955 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 53014 |||||||| || | || ||||||| || ||| | | ||| || ||||||||||| Sbjct 806346 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 806405 Query 53015 GTTTTATA-AACTCGCTTAATATCTTCTGG--AAGGTTTG-TATTCTGAATAGATCCACC 53070 |||||||| || || ||| || | ||| || || |||| | || || || || |||| Sbjct 806406 GTTTTATATAATTCTCTT-ATGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACG 806464 Query 53071 ATCT-ACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTC 53129 || | || |||| || || || || |||||||| | || ||| || ||| || Sbjct 806465 ATTTGACAGTAAT-AAGTTTTTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTT 806523 Query 53130 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGA-CAATACTCTCCGAGTGTAAATA 53188 ||| | ||| |||| || || || || ||||| || | | | ||||||| Sbjct 806524 GAAGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTATGTTC-TGTGTAAACG 806582 Query 53189 TTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 53248 || || || || || | ||||| || ||||||| ||||||||||| ||||| | Sbjct 806583 TTTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCA 806642 Query 53249 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 53308 ||||| | |||||||| ||| || | | ||| | || | || | ||||| ||| Sbjct 806643 GGCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGA 806702 Query 53309 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 53368 | |||| | ||||||||| | || ||| ||||| || Sbjct 806703 GCCGCCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCCT 806762 Query 53369 TT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424 || ||||| || ||| ||||||| ||||| || || | | | || | || Sbjct 806763 TTGCTAACTGGGCTA----CCTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTC 806818 Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT---TAGATC 53481 ||| || |||||||| ||||||||||| || |||||||| || | | ||| |||| | Sbjct 806819 ACAGCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAAC 806878 Query 53482 TTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 53541 || | ||| || |||||||| | | ||| |||||||| || |||||||| Sbjct 806879 ---AGCATTTTCGCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTG 806935 Query 53542 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 53601 ||||| ||| | || || | || | | ||||||| ||| | ||| || | ||||| Sbjct 806936 GACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATA 806995 Query 53602 ATAATTAATATCTATAATTTTATTGAGGTT-TCTGACAATTACTTTGACCACATCCTTCA 53660 || ||||| || || ||||| |||||||| | || | ||||| || || |||| Sbjct 806996 GTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTG-TAACTTCTTTCA 807054 Query 53661 GTTTGAGAAAATCAAATTGTCCATC--TA-TTACAAACATGTTCAATGCAATAGATGCCA 53717 |||| |||||| ||||| || || | || |||||||| | ||||| || ||| Sbjct 807055 ATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGCCCA 807114 Query 53718 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 53777 | || ||||| || | |||| | | | ||||| | || || || | || |||| Sbjct 807115 GGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACTAAAGTTAC 807174 Query 53778 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 53836 |||| || || || || | || |||||| || || || || ||||| || ||| Sbjct 807175 TACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATCTTTGTAA 807233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593709347070480