Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq54 125 5e-24 >seq54 Length=1370671 Score = 125 bits (138), Expect = 5e-24 Identities = 327/496 (66%), Gaps = 2/496 (0%) Strand=Plus/Minus Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 ||| || ||||| ||||| || | ||| || || ||||| || || || | || Sbjct 1327272 ATGTGCAATCATGTTCGTTAAGAGGGCATACGAGGCTATATTAAAGGGGACACCCAAGCC 1327213 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 |||||| || | |||||| | || ||| | | | || ||||||||| || Sbjct 1327212 CATATCTGCACTACGTTGATAAAGTTGGCAGCACAATTCATTATTGGCCACATAAAATTG 1327153 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301 | ||| ||||||||| || || ||||||||||| | ||||| |||||||| | Sbjct 1327152 AGCCAAGCAATGACAGGGTGGTAAAGCCATTTTTGGTATATCTACCGGATTCCAAGAGGA 1327093 Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361 | | ||| | || ||| || || ||||| ||| || |||| || | |||||||| Sbjct 1327092 TAAAATCATACGTCGATCTGTAGGATTTGTCGTTATTGTTCTAATGATGTTTTTTAATTG 1327033 Query 97362 ATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421 || || ||||| ||||||||| | | | | | ||||| ||||||||||| | Sbjct 1327032 GTCGACCCCTTCCGTACCATAATTTTCGTGACAAGTTCTATATTGCGCTCCAAAATGTCG 1326973 Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTT 97481 ||| || || ||||||| ||||| | ||| |||||||| | |||| ||||| | Sbjct 1326972 CCACTGAAAACCATAAATGGGTCCTAAGTCACCTTCTTCGCGATCATTAAAACCGCATCT 1326913 Query 97482 ATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCA-CACCAGATGCTGCAAGCT 97540 ||| ||| | | | | ||| ||||||| || || | || || ||| Sbjct 1326912 ATCCAAAAATTCGCGACTACTATTACCATCCCATATATGGATGTTTTTATTTTG-TAGCA 1326854 Query 97541 CTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAA 97600 ||||| ||||| || || |||||||| || | ||||| || ||| | | ||||| Sbjct 1326853 CTTTGGCATCAGTGCTGCCGCTTATAAACCATAATAGCTCTTCTACTACAGCACGCCAAA 1326794 Query 97601 ATACTCTCTTAGTTGT 97616 ||||| | || || || Sbjct 1326793 ATACTTTTTTCGTAGT 1326778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346777022164070