Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq146 107 4e-18 >seq146 Length=585010 Score = 107 bits (118), Expect = 4e-18 Identities = 116/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 189479 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGG 189538 ||||| || |||||||| ||||||| || ||||||||||| || ||||| || |||||| Sbjct 532040 AGAGAGGGTAAAATGCACGGTTTTTTGCGCATGTATTGGGCGAAAAAGATTCTGGAATGG 531981 Query 189539 ACTAGAACACCTGAAGACGCTTTGAGTTATAGTA-TCTATTTGAACAACAAGTACGAACT 189597 ||| ||| |||||||||||||| || || | | | ||| || | |||||| | Sbjct 531980 TCTAAAACTCCTGAAGACGCTTT-AGAAATTTCACTATTTTTAAATGATAAGTACAGTTT 531922 Query 189598 AGACGGCACGGATCCTAACGGATACGTAGGT 189628 || || |||||||||||||| ||||| ||| Sbjct 531921 GGATGGAACGGATCCTAACGGTTACGTGGGT 531891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923177747526040