Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq148 545 3e-150 seq240 452 5e-122 seq184 306 5e-78 seq89 226 4e-54 seq127 100 4e-16 >seq148 Length=545759 Score = 545 bits (604), Expect = 3e-150 Identities = 1509/2290 (66%), Gaps = 50/2290 (2%) Strand=Plus/Minus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || || | ||| ||||| |||||| |||||| || || || | |||||| ||||| || Sbjct 221666 TTATCGACTGTAAATTGTATGGGATTGGATGCTGGCTTTGTCCTTAGATAATACATACCA 221607 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 ||||| | ||| ||||||| ||||||||||| | | ||| |||||| | Sbjct 221606 GTTTTCAAACCCGCTTTCCATCCATAAAAATGCATGGAGGACAATTTACCATAACTAGCG 221547 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 || || ||||| | || | ||||| |||||||||||||| || || | || ||||| Sbjct 221546 TCAGCCATATGTACGTTAAACGATTGGCTTTGATCGATGAAAGCGCCGCGATCGACAGCC 221487 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 65069 || | || | | ||| ||| ||||||||||| |||||||| | | || || ||| Sbjct 221486 ATGTCAATTGTTGACTTCAGTGAAATTTCCCAAACTGTTTTATATAATTCTTTTATGTCT 221427 Query 65070 TCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCC-ATAATCCTATTCTTGAT 65125 | || | | || | | || || || || |||| || |||| ||||| || || || Sbjct 221426 TTAGGTATGGCTTCGATTTTTTGTATTGAACCACGATGTGCCCATAATAAGTTT-TTCAT 221368 Query 65126 CTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT-T 65184 || ||||||| | || ||| || ||| || |||| | ||| |||| || || | Sbjct 221367 GTCGCCATTCCAAAGATTCAACTCCGTCAAATCTTTAAGCAAATGATGATTGACCACAAT 221308 Query 65185 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 65244 ||||| | ||||| ||||| | || || |||| || |||||||| || | || | Sbjct 221307 GAAAT-CACCAGATAATACACGTCGTGTATAAACGTTTGAAGTATACGGCTCAAAGGATT 221249 Query 65245 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 65304 | || || || | |||||||||||| ||||| || ||||| || |||||||| ||| || Sbjct 221248 CGTTGTTGCCAAGAATTTGAGCAGTAGATGCCGTAGGCATTGGGGCCACCAACAAAGAAT 221189 Query 65305 TTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACG 65364 | | | ||| | || |||| | |||||| |||| |||||| ||||||||| | | Sbjct 221188 TACGCACACCATGATTTTTGATGTCATCTTTAAGAGCCGCCCAATCCCAAAGATCAGTAG 221129 Query 65365 GTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGATCCTACA 65420 | ||| |||||||| || ||||| ||| || || Sbjct 221128 GCTTCTTGTTCCACATGTCATATTGAAGAATACCTTTGCTAACTGGGCTAC----CTTCA 221073 Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 ||||| ||||| || || | | | || | ||||| || |||||||| ||||||||| Sbjct 221072 TATGTTTCGTACGGGCCATATTGTTTGGCCAACTCACAGCTAGCCTCTAAAGCACCGTAA 221013 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTA---GATCTTGTGCTTCCAGGCTATCAAATGGA 65537 || ||||||||||| || | | ||||| || | ||| ||| ||| ||||| Sbjct 221012 TATATGGTTTCGAAAATTTGTTGATTTAATAGAACAGCATTTTC---GCTTTCATATGGA 220956 Query 65538 TAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 65597 ||| | | ||| || ||||| || |||||||| || || ||||| || || | || Sbjct 220955 TAACGCATTAAAATTAATGCGTCAGCAAATCCTTGGACGCCTATACCAATTGGACGGTGA 220896 Query 65598 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 65657 | | |||||| ||| ||||| || | |||||||| ||||| || || ||||| ||| Sbjct 220895 CGCAAATTAGATCTTTTGGCTTCCGGCAACGGATAATAGTTAATGTCAATTATTTTGTTG 220836 Query 65658 AGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATC- 65716 || || || || | || || || |||| |||| |||||| || | ||| Sbjct 220835 AGGTTCCTTGTTATAAGCTTCGTAACTTCTTTCAATTTGTTAAAATCGTATTTTTTATCC 220776 Query 65717 -TATT-ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 65774 || | || |||||||| ||||||| || ||||| || ||||| || | |||| ||| Sbjct 220775 GTAGTCACGAACATGTTTAATGCAATCGAGGCCAGGTTGCAAACTGCAATTTCATCAGCC 220716 Query 65775 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 65834 | |||| | || || || || | |||||| | || || || || | || ||| Sbjct 220715 GAAGTGTATTCGACAATTTCTGTACACAAGTTACTAGATTTTATAGTACCAATGTTCTGT 220656 Query 65835 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 65894 ||||||||||| || || ||||| || ||||| || | ||||| ||||| || Sbjct 220655 TGATTACTCTTGCGATTGCAAGCATCTTTGTAAAGCATATAAGGAGTTCCAGTCTCCGCT 220596 Query 65895 TGAGA-TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 65953 ||||| || ||| | || ||| | | | ||||| || ||| | ||| || ||| Sbjct 220595 TGAGACTTGCATATT-GCAAACCACAAGGCACGAGCTTTAATTGT----TTGATTCGCTT 220541 Query 65954 T----TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 66009 | || ||||||||| | || ||| || || || ||||||||||| | || Sbjct 220540 TGCCCTCACTTTCGTATTTCATGTATAATTTGTCAAATTCATCTCCCCAAACTTCACACA 220481 Query 66010 ATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 66069 | |||||||||| || |||||||| | ||||| || || ||||||| |||| ||||| Sbjct 220480 AACCAGGACATTTATGAGGACACATTAGAGACCAATCGCCATCATCCTCTACTCTTTTCA 220421 Query 66070 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTC 66129 | || ||||| || ||||| || || ||| ||||| | | || || || ||| | | Sbjct 220420 TGAACAGATCCGGTATCCATAGGGCATAAAACAAATCGCGTGCTCGATCTTTCTCCTCAC 220361 Query 66130 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATA 66189 | ||||||||| | ||| || || | | || ||| ||||| || |||||||| | Sbjct 220360 CAAAATTCTTTTTCAAATCTAGAAATTCGAAAACATCTGCGTGCCAAGGCTCCAAGTACA 220301 Query 66190 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 66249 | || | | | || || ||||| || |||||||||| || | || | ||| Sbjct 220300 TAGCAAAAGCACCTGGACGTTTTCCACCACCCTGATCTACATAACGGGCAACACTGTTAA 220241 Query 66250 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 66309 | | | |||||| |||| || ||||| ||| | || || || | || | | | Sbjct 220240 ACAGACGCAACATAGGAACAAGACCATCCGATACATCACCAGTGCCTGCTATCTTCGTCC 220181 Query 66310 CACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | |||| || | | || || |||||| ||||| || || || ||| | Sbjct 220180 CTTTTGCTCGCACGCAATGAACATTTAAACCTATCCCCCCGGCTGACTTGGAAATTTTAG 220121 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGA 66428 | ||| | | || | | | || || | | || || || |||| ||| Sbjct 220120 CACATTGGTCTACAGCCTTCAAAATACCTTTCAAGGAGTCTTCAGGGATCGTTAGCAAGA 220061 Query 66429 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 66488 || || | |||| ||| |||| ||||| | ||| |||||| || || | ||| || Sbjct 220060 AACAAGAT-GACAATTGTGGACGTATAGTTGCAGCACCAAATAAAGTTGGCGTAGCATGA 220002 Query 66489 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTG 66547 ||||| | || || | ||||| || || |||||||| | || || || || | Sbjct 220001 GTAAAATAGCGCTCCGACATAAGATTATATGTTTCAATAGCAGCCTCAATGTCATCACCG 219942 Query 66548 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 66607 ||||| || | ||||||||||||| ||| || || || | || | || || | Sbjct 219941 -TGAATACCAATGGCGACACGCATTAGCATATGTTGCGGCCGCTCCGCAATTTTACCATC 219883 Query 66608 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 66667 || || ||||| || ||| ||||| |||||||||||||||| | ||||| ||||| Sbjct 219882 AATCTTTAACAAATAAGATCGTTCCAGAGTTTTAAAACCAAAAAAATTGTAATTGAAGTC 219823 Query 66668 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATG 66725 || || || ||||| |||| || | | ||| || | | | |||| ||| Sbjct 219822 CCGATCATATATAATGGCCGAATTTAATCGATCAGCATTCTCTCTTATAACATTGTAATG 219763 Query 66726 GTAATACTTGAAATAATCGGAGAATGTTTCCCATT-TTTAGGATTGACATAGTTGAATAA 66784 | ||| | ||| ||||| || || | |||| | || | | || | || || Sbjct 219762 G-AATTC-TGATATAATGGGCGACGGGGAATCATTATCTACGTT----AT-GATG--TAG 219712 Query 66785 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTAT 66844 ||| ||| |||||| || | ||| ||||||||||| |||| ||||||||| || || Sbjct 219711 ATCACTCATAACTTCAGAGAACACTTTCTTTGTTTCTTTATGTAAATTTGATACCGCAAT 219652 Query 66845 TCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGC 66904 || |||||||| ||| |||||||||||||| | | || ||| || |||||||| Sbjct 219651 TCGAGCGGCTAAAATAGCATAATCCGGATGATCGATGGTCTTGCAGGCGGCAATTTCGGC 219592 Query 66905 TGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 |||||| | || | |||| ||| || || || || | ||| | | |||||||| Sbjct 219591 CGCCAGATTATCAAGTTCTTGCGTAGTCACACCGGCGTACAATCCGTTAACAACCTTCAA 219532 Query 66965 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 67024 || || ||||||| ||| | | | |||||||| | ||| ||| | Sbjct 219531 AGTAATGGCGGCTGGATCTACGAAATCCATATGAAGACCATAACACAGCTTTTGAATTCT 219472 Query 67025 AGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAATGACAAACAT 67084 || ||||||||||||| ||| ||||||| ||||| ||||| | || |||| Sbjct 219471 TGACATGATTTTATCAAAATGGACCATTTCCTTACGGCCATTGCGTTTCACCACGAACAA 219412 Query 67085 TTTTGTTGCT 67094 || ||||| Sbjct 219411 CTTGTTTGCT 219402 >seq240 Length=301270 Score = 452 bits (500), Expect = 5e-122 Identities = 1455/2223 (65%), Gaps = 64/2223 (3%) Strand=Plus/Minus Query 64866 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 64925 || || | ||| || ||||| || ||||| | ||| |||| || |||||||| ||| Sbjct 294584 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 294525 Query 64926 CTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCG 64985 | | ||| |||||| || || |||| || ||||| | ||||||||||| ||| Sbjct 294524 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 294465 Query 64986 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 65045 |||||||| || | || ||||||| || ||| | | ||| || ||||||||||| Sbjct 294464 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 294405 Query 65046 GTTTTATA-AACTCGCTTAATATCTTCTGGAA--GGTTTG-TATTCTGAATGGATCCACC 65101 |||||||| || || |||| | | ||| || | | |||| | || || || || |||| Sbjct 294404 GTTTTATATAATTCTCTTA-TGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACG 294346 Query 65102 ATCTGCCA-TAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTC 65160 || || || |||| || || || || |||||||| | || ||| || ||| || Sbjct 294345 ATTTGACAGTAATAAGTTT-TTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTT 294287 Query 65161 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGAC-AATACTCTCCGAGTGTAAATA 65219 ||| | ||| |||| || || || || ||||| || | | | ||||||| Sbjct 294286 GAAGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTATGTTCT-GTGTAAACG 294228 Query 65220 TTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 65279 || || || || || | ||||| || ||||||| ||||||||||| ||||| | Sbjct 294227 TTTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCA 294168 Query 65280 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 65339 ||||| | |||||||| ||| || | | ||| | || | || | ||||| ||| Sbjct 294167 GGCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGA 294108 Query 65340 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 65399 | |||| | ||||||||| | || ||| ||||| || Sbjct 294107 GCCGCCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCCT 294048 Query 65400 TT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 65455 || ||||| ||| || ||||||| ||||| || || | | | || | || Sbjct 294047 TTGCTAACTGGGCTAC----CTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTC 293992 Query 65456 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTA---GATC 65512 ||| || |||||||| ||||||||||| || |||||||| || | | ||||| || | Sbjct 293991 ACAGCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAAC 293932 Query 65513 TTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 65572 ||| ||| || |||||||| | | ||| |||||||| || |||||||| Sbjct 293931 AGCATTTTC---GCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTG 293875 Query 65573 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 65632 ||||| ||| | || || | || | | ||||||| ||| | ||| || | ||||| Sbjct 293874 GACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATA 293815 Query 65633 ATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTGACCACATCCTTCA 65691 || ||||| || || ||||| ||||| || | || | ||||| || || |||| Sbjct 293814 GTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTA-ACTTCTTTCA 293756 Query 65692 GTTTGAGAAAATCAAATCGCTCATC--TATT-ACAAACATGTTCAATGCAACAGATGCCA 65748 |||| |||||| || | | || || | || |||||||| | |||| || |||| Sbjct 293755 ATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGGCCA 293696 Query 65749 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 65808 | || ||||| || | |||| | | | ||||| | || || || | || |||| Sbjct 293695 GGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACTAAAGTTAC 293636 Query 65809 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 65868 |||| || || || || | || |||||| || || || || ||||| || |||| Sbjct 293635 TACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATCTTTGTAAA 293576 Query 65869 GAATGAATGGAGTACCAGTTTCAATCTGAG-ATTCTATAATCGCTTTCCAGACGACTCGA 65927 | || | |||| ||||| || |||| | | |||| | || ||| | | | ||| Sbjct 293575 GCATATAAGGAGCTCCAGTCTCTTCTTGAGCACTGTATATT-GCGAACCACAAGGCACGA 293517 Query 65928 GCCTTTATTATAGATTTGTATCTCTTT----TCTCTTTCGTATAGTGTATACAATCGTTC 65983 || || ||| | ||| | || |||| || ||||||||| | || ||| || Sbjct 293516 GCTTTAATTGT---TTTAT-TCGCTTTGCCCTCACTTTCGTATTTCATGTATAATTTGTC 293461 Query 65984 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 66043 || || | ||||||||| | ||| ||||| |||| || |||||||| | ||||| Sbjct 293460 AAATTCATGTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATTAGAGACCA 293401 Query 66044 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA-TA 66102 || || ||| ||| |||| |||||| || ||||| || ||||| || || |||| || Sbjct 293400 ATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC-ATAATGTA 293342 Query 66103 AATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 66162 |||| | | | | |||||| || || |||| | |||| | || || || | | || Sbjct 293341 AATCACGTGGACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAATTCGAAAA 293282 Query 66163 TATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 66222 |||| |||||| || ||||||||||| || | | | || | ||||| | || | | Sbjct 293281 TATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCTCCCGTCTT 293222 Query 66223 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 66282 ||| || || | ||| || || | || |||||||| || | || |||| | |||| Sbjct 293221 GATGTACATAACAGGCGAGATTGTTGAACACGCTCAACATAGGGACAAGACCACTCGATG 293162 Query 66283 TACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACC 66340 ||||| || || || || | | || |||| || || | | ||| |||| | Sbjct 293161 CGCCATTAGTACCTGATATCTTTGTACCTTTTGCTCGTATGCAGTGGATATT--TAGAGC 293104 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 || || |||| | ||||| | || ||| | | || | | | | || || || Sbjct 293103 TACCCCACCTGTCGACTTAGAAACGGCAGCACATTGATATACGGCCTTAAAAATACCATC 293044 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 || ||| || ||| | |||| ||| | |||| ||| ||||| | | | Sbjct 293043 AATGGAATCTTCTGGCATCGTTAGTAAGAAATATGATGACAATTGCGGACGAACAATAGC 292984 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 66520 ||| |||||| || | ||||| || |||| | | ||||| | ||||| || || Sbjct 292983 AGCAGCAAATAAAGTTGACGAAGCATGACTAAAATAATGCTCAGACATAAGATTATATGT 292924 Query 66521 CTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGT 66579 |||||||| | ||| || || || | ||||| || | ||||||||||||| ||| | Sbjct 292923 TTCAATAGCAGCGTCAATCTCATCACCG-TGAATACCAATGGCGACACGCATTAGCATAT 292865 Query 66580 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 66639 | || || | || || || || || |||||| |||| || |||| |||| ||||| Sbjct 292864 GTTGTGGCCGCTCCACAATTTTACCATTAATTTTCCACAAATAAGATTCCTCCAGAGTTT 292805 Query 66640 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT 66699 ||||||||||| | |||| ||||| || |||| ||||| |||| || | | || Sbjct 292804 TAAAACCAAAAAAAGTGTAATTGAAGTCCCGATCGTGTATAATGGCCGAATTTAATCGAT 292745 Query 66700 CCTTATATTTGTTAACTACAT--CCATGGTAATACTTGAAATAATCGGAGAATGTTTCCC 66757 | || || || | |||| |||| ||| | || | || || || | || Sbjct 292744 CAGCATTGTTTTTTATAACATTGTAATGG-AATTC-CGATACTATGGGCGACGGGGAACC 292687 Query 66758 AT-TTTTAGGAT-TGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 66815 || | || | | ||| ||| | | | ||| || || ||| | ||| ||| Sbjct 292686 ATCATCTACGTTATGATGTAGGTCACT--------CATAACCTCGGAAAACATTTTCTTT 292635 Query 66816 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGT 66875 |||||||| |||| ||||||||| || |||| ||| |||| ||| |||||||||||||| Sbjct 292634 GTTTCTTTATGTAAATTTGATACCGCAATTCGAGCAGCTAAAATAGCATAATCCGGATGA 292575 Query 66876 TGTGTAGTACAAGTGG-CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 66934 | || || || | || | || ||| || || ||| | ||||||||| ||| ||||| Sbjct 292574 TCGGTGGT-CATGCGGACCGCGGTTTTAGCAGCTAGATTATCCAATTCTTGCGTAGTTAC 292516 Query 66935 TCCATTATATATTCC-TTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAG 66993 || | | || ||| | || |||| || || | ||||||| ||| Sbjct 292515 ACCGCGGTGCAAGCCGCTGGCT-ACTTTCAAAGTAATGGCGGTCGGATCTACGAAATCCA 292457 Query 66994 TGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTT 67053 | || | |||||||| |||||| || | ||| ||||||||||| || ||| ||| Sbjct 292456 TATTAAGACCATAACACAATTTTAGGATTCTAGAAGTGATTTTATCGAAATGGACCATTT 292397 Query 67054 CCT 67056 ||| Sbjct 292396 CCT 292394 Score = 187 bits (206), Expect = 3e-42 Identities = 490/735 (67%), Gaps = 17/735 (2%) Strand=Plus/Plus Query 65565 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGA 65624 |||||||| ||||| ||| | || || | || | | ||||||| ||| | ||| || Sbjct 290648 AATCCTTGGACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGC 290707 Query 65625 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTGACCAC 65683 | ||||| || ||||| || || ||||| ||||| || | || | ||||| || Sbjct 290708 AGCGGATAGTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTGTA-AC 290766 Query 65684 ATCCTTCAGTTTGAGAAAATCAAATCGCTCATC--TATT-ACAAACATGTTCAATGCAAC 65740 || |||| |||| |||||| || | | || || | || |||||||| | |||| Sbjct 290767 TTCTTTCAATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAAT 290826 Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800 || |||| || ||||| || | |||| | | | ||||| | || || || | Sbjct 290827 TGAGCCCAGGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACT 290886 Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860 || |||||||| || || || || | || |||||| || || || || ||||| Sbjct 290887 AAAGTTACTACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATC 290946 Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG-ATTCTATAATCGCTTTCCAGA 65919 || ||||| || | |||| ||||| | |||| | | |||| | || ||| | Sbjct 290947 TTTGTAAAGCATATAAGGAGCTCCAGTCTTTTCTTGAGCACTGTATATT-GCGAACCACA 291005 Query 65920 CGACTCGAGCCTTTATTATAGATTTGTATCTCTTT----TCTCTTTCGTATAGTGTATAC 65975 | | ||||| || ||| | ||| | || |||| || ||||||||| | || Sbjct 291006 AGGCACGAGCTTTAATTGT---TTTAT-TCGCTTTGCCCTCACTTTCGTATTTCATGTAT 291061 Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035 ||| || || || ||||||||||| | ||| ||||| |||| || |||||||| Sbjct 291062 AATTTGTCAAATTCATCTCCCCAAACTTCACACAAACCAGGGCATTTATGAGGACACATT 291121 Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095 | ||||| || || ||| ||| |||| |||||| || ||||| || ||||| || || Sbjct 291122 AGAGACCAATCGCCATCAGCCTCTACTCTTTTCATGAAAAGATCCGGTATCCATAGGGC- 291180 Query 66096 ATAA-ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154 |||| |||||| | | | | |||||| || || |||| | |||| | || || || Sbjct 291181 ATAATGTAAATCACGTGCACGGTTTTCCTCCTTACCAGTATCCCTTTTCAAATTTAGAAA 291240 Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214 | | |||||| |||||| || ||||||||||| || | | | || | ||||| | Sbjct 291241 TTCGAAAATATCTGCATGCCAAGGCTCCAAGTATATAGCAAGAGCACCTTGACGTTTTCT 291300 Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 || | |||| || || | ||| || || | || ||||| || |||| || ||| Sbjct 291301 CCCGTCTTGATGTACATAACAGGCGAGATTGTTGAACACGCTCAATATAGGAACAAGACC 291360 Query 66275 ATTGGATGTACCATT 66289 ||| |||| ||||| Sbjct 291361 ATTCGATGCGCCATT 291375 >seq184 Length=525875 Score = 306 bits (338), Expect = 5e-78 Identities = 501/720 (70%), Gaps = 3/720 (0%) Strand=Plus/Minus Query 35973 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032 ||||||| | | ||| | ||| || ||| ||||||| ||| ||| ||||| || Sbjct 28985 CCAATTCTAATAGCAAACGATCCGCTACATATTCTATGTATTGACACATACTTTCATTAT 28926 Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092 |||| || || | || ||||| ||||| | || |||||||| | |||||| || | Sbjct 28925 TCATACCGATTAAATTGACTGGTAGAGCTTCTGTCAGAAATTCCTTTTCAATTTTAACGG 28866 Query 36093 CGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 36152 | || ||||| || | || ||||| ||||| | | |||| |||||||| Sbjct 28865 CATCGGTTATTATTTCCAATATGCGTTCTTTGGTCGGTTTTTGTATCAAATATTTAAACA 28806 Query 36153 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 36212 | ||| || || ||||| |||| ||| || || | |||||||| || ||||| | Sbjct 28805 TTAAAACCGCAAATTCGCAATGTAAACCTTCATCGCGTGATATTAATTCATTAGAAAATG 28746 Query 36213 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 36272 | || || ||||||| ||||| || |||||||||||||| || ||||| |||| || Sbjct 28745 TTAGACCCGGCATTATTCCACGTTTCTTAAGCCAAAATATCGAAGCAAAACTTCCACTAA 28686 Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTC 36330 |||| || ||||| || || ||||| || || | | ||| ||| || || | | Sbjct 28685 AGAATATACCTTCGACGGCAGCAAAAGCTATGACACGCTCACCAAAATTCGCCGAACGCG 28626 Query 36331 ATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 ||| |||||| | |||||| || || |||||||| || | ||||| ||||| || | Sbjct 28625 ATGATATCCAAGCTAAAGCCCATTCCGCTTTCTTTTTAACTAACGGCATCGTCTCAATGG 28566 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 ||||||| ||||| | ||| || |||| | | |||| ||||| | | ||||| Sbjct 28565 CATTAAAAAGATAATCGCGTTCTTTCGGATCTGCGATAAATGTTTCAATAAGTAAACTAT 28506 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 |||||||||| || | ||||| ||||| |||||||| || || || || | ||| |||| Sbjct 28505 ACATTTCCGAGTGTACATTTTCGATGGCTATTTGAAAACCATAAAAGCAACGAGCTTCGG 28446 Query 36510 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 36569 | | || |||||| | |||| ||||| ||||||| ||||| || || |||||| | Sbjct 28445 TTACTTGAACTTCTTGAGAAAAACGTTCCACTAAATTCTCATTAACAATGCCGTCAGATG 28386 Query 36570 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCC 36629 | |||||||| ||||| |||||| ||||||| ||| | |||| | | || Sbjct 28385 CCGCAAAAAAAGCCAAAACATGTGAAATAAAATGACGTTCATCATCAGTTAATCGCTCCC 28326 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 ||| || | |||| || | ||| || |||||| | |||||||| || || || |||| Sbjct 28325 AATGATCAAGATCTGCAGCGAGATCAACCTCTTCCGCCGTCCAAAAAGAAGCTTCAGCCT 28266 >seq89 Length=807233 Score = 226 bits (250), Expect = 4e-54 Identities = 669/1019 (66%), Gaps = 28/1019 (3%) Strand=Plus/Plus Query 64866 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATA 64925 || || | ||| || ||||| || ||||| | ||| |||| || |||||||| ||| Sbjct 806226 TTTGTTCTTAGGTAATACATACCAGTTTTCAAACCTGCTTTCCACCCATAAAAATGAATA 806285 Query 64926 CTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCG 64985 | | ||| |||||| || || |||| || ||||| | ||||||||||| ||| Sbjct 806286 GAAGACAATTTACCATAACTTGGTTCAGCTACGTGTATATTAAATGATTGACTTTGGTCG 806345 Query 64986 ATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATA 65045 |||||||| || | || ||||||| || ||| | | ||| || ||||||||||| Sbjct 806346 ATGAAGGCACCGCGATCGACAGCCATGTTAATGGTTGACTTCACTGAAATTTCCCAAACT 806405 Query 65046 GTTTTATA-AACTCGCTTAATATCTTCTGG--AAGGTTTG-TATTCTGAATGGATCCACC 65101 |||||||| || || ||| || | ||| || || |||| | || || || || |||| Sbjct 806406 GTTTTATATAATTCTCTT-ATGTGTTCAGGTATAGCTTTGATTTTTTGTATTGAACCACG 806464 Query 65102 ATCTGCCA-TAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTC 65160 || || || |||| || || || || |||||||| | || ||| || ||| || Sbjct 806465 ATTTGACAGTAAT-AAGTTTTTCATTTCGTCATTCCAAAGATTCAACTCCGTCAAATCTT 806523 Query 65161 TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGA-CAATACTCTCCGAGTGTAAATA 65219 ||| | ||| |||| || || || || ||||| || | | | ||||||| Sbjct 806524 GAAGCAAATGATGATTGACCACCATGAACTCACCAGATGAAGTATGTTC-TGTGTAAACG 806582 Query 65220 TTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 65279 || || || || || | ||||| || ||||||| ||||||||||| ||||| | Sbjct 806583 TTTGAAGTGTATGGCTCAAAAGACTGGTTGTTTCCCAGAATTTGAGCAGCAGATGCTGCA 806642 Query 65280 GGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGA 65339 ||||| | |||||||| ||| || | | ||| | || | || | ||||| ||| Sbjct 806643 GGCATTGCAGCCACCAACAAAGAGTTACGCACACCATGAATTTTTATGTGTTCTTTAAGA 806702 Query 65340 GGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCG 65399 | |||| | ||||||||| | || ||| ||||| || Sbjct 806703 GCCGCCCAGTCCCAAAGATCAGTAGGCGTCTTGTTCCACATGTCATATTGAAGAATGCCT 806762 Query 65400 TT----ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 65455 || ||||| || ||| ||||||| ||||| || || | | | || | || Sbjct 806763 TTGCTAACTGGGCTA----CCTTCATATGTTTCGTACGGGCCATATTGTTTGGCCAACTC 806818 Query 65456 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT---TAGATC 65512 ||| || |||||||| ||||||||||| || |||||||| || | | ||| |||| | Sbjct 806819 ACAGCTAGCCTCTAACGCACCGTAATATATAGTTTCGAAAATTTGTTGATTTAATAGAAC 806878 Query 65513 TTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTG 65572 || | ||| || |||||||| | | ||| |||||||| || |||||||| Sbjct 806879 ---AGCATTTTCGCTCTCGTATGGATAACGCATTAAAATTAACGCGTCAGCAAATCCTTG 806935 Query 65573 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 65632 ||||| ||| | || || | || | | ||||||| ||| | ||| || | ||||| Sbjct 806936 GACACCTATAGCAATCGGACGGTGACGCATATTAGATTTTTTGGTTTCCGGCAGCGGATA 806995 Query 65633 ATAATTAATATCTATAATTTTATTGAGATT-TCTGACAATTACTTTGACCACATCCTTCA 65691 || ||||| || || ||||| ||||| || | || | ||||| || || |||| Sbjct 806996 GTAGTTAATGTCAATTATTTTGTTGAGGTTCTTTGTTATAAGCTTTG-TAACTTCTTTCA 807054 Query 65692 GTTTGAGAAAATCAAATCGCTCATC--TA-TTACAAACATGTTCAATGCAACAGATGCCA 65748 |||| |||||| || | | || || | || |||||||| | |||| || ||| Sbjct 807055 ATTTGTAAAAATCGTATTGTTTCTCCGTAGTCACGAACATGTTTAGCGCAATTGAGCCCA 807114 Query 65749 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTAC 65808 | || ||||| || | |||| | | | ||||| | || || || | || |||| Sbjct 807115 GGTTGCAAACTGCAATTTCATCAACTGATGTATATTCGACAATTTCTGTACTAAAGTTAC 807174 Query 65809 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAA 65867 |||| || || || || | || |||||| || || || || ||||| || ||| Sbjct 807175 TACATTTTATTGTACCAATGTTCCCTTGATTGCTTTTGCGATTGCAAGCATCTTTGTAA 807233 >seq127 Length=755962 Score = 100 bits (110), Expect = 4e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 31215 AATACCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATA 31274 ||| ||||| |||||||| |||||||| ||||||||||||||||| || ||||| | ||| Sbjct 123935 AATCCCTAACTCCTTGACTTGAGTTAAAGATCTCCAATCCATATTCGCACTTCCAATATA 123876 Query 31275 AATATGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 31322 || ||| ||||||| ||||| |||||||| || | ||||| || Sbjct 123875 AAAATGCTTATTATCCACAATCCACAATTTTGTGTGTAATACTCCACC 123828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658159216958840