Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq439 141 2e-29 >seq439 Length=76666 Score = 141 bits (156), Expect = 2e-29 Identities = 302/451 (67%), Gaps = 0/451 (0%) Strand=Plus/Minus Query 26936 TTGTGCTTACTGATACCAAATTAAAAAACCTCAAACCGCAGGACAAACTGTATAAGGTTT 26995 || ||||||| || || ||| ||| |||||| ||||| | |||||||| || || | Sbjct 76079 TTATGCTTACAGACACAAAACTAAGAAACCTAAAACCTCGCGACAAACTCTACAAAATCC 76020 Query 26996 CAGATCGTGACGGGCTGTATGTTGCGGTGCTTACTTCCGGCTCCGTCTCGTTCAGGTACG 27055 | ||| | |||||||| || || || || || | ||| || | |||||| | || | Sbjct 76019 CCGATAGAGACGGGCTCTACGTAGCTGTTCTGCCAAGCGGTTCTGCATCGTTCCGCTATG 75960 Query 27056 ACTACCGCATTAACGGACGACGGGAAACGCTGGTCATTGGTCAGTATGGTTGTGACGGTA 27115 |||||||||| | || | || ||||| || |||||| ||||| |||||||| Sbjct 75959 ACTACCGCATACATGGCAGGCGTGAAACTTTGACGATTGGTAGATATGGAGCTGACGGTA 75900 Query 27116 TCAGTCTGGCGGAAGCGCGTGAAGAACTCATTGCTGCAAAGAAGCTGCTAAAGGCAGGCC 27175 |||| | || ||||| ||||||||| | | | || || || | |||| || |||| | Sbjct 75899 TCAGCTTAGCCGAAGCCCGTGAAGAATTACATACCGCCAAAAAACAGCTAGAGTCAGGTC 75840 Query 27176 ACTCGCCAGCTGCGGCTAAACGTGACGGTATCAAAAAGATACACGGTGCTGAGACATTCG 27235 | || || ||||| | ||||| || ||||| || || | | ||| || || | Sbjct 75839 AGTCACCTGCTGCCGTAAAACGAGAAAATATCAGGCAGCTAAAGGCTGCAGATCGCTTTG 75780 Query 27236 CGGTACATACCGACAGCTATATGAAGCACGTCATTCTGGCTGACAGTACCCGGGCAATGA 27295 || |||| | |||||||| || || | ||||| || || ||||||| Sbjct 75779 AGGACTATACTTTCGCTTATATGAATCATGTGCGATTTGCTGAAAGCACAAAAGCAATGA 75720 Query 27296 AACAGGCCGTTATCAAGCGCGATATCATGCCGGTCCTGGGTAACAAGATGATGGCTGAGA 27355 | || || |||||| | || || || | || |||||||| || | ||| || | Sbjct 75719 AGCAAGCGGTTATCGATCGTGACATATTACCTACACTGGGTAAAAAACTTATGCACGAAA 75660 Query 27356 TAACCACCGGCATGGTTCGTGACCTGTGCGA 27386 |||| || |||| | ||||| || ||||| Sbjct 75659 TAACTACTACCATGTTACGTGATCTATGCGA 75629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126823113504846