Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20brevipalpis_20[genbank_20GCA_5F000671755.1_202014-05-08] 1,651 sequences; 315,360,362 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq813 161 3e-35 >seq813 Length=1717 Score = 161 bits (178), Expect = 3e-35 Identities = 223/311 (72%), Gaps = 2/311 (1%) Strand=Plus/Minus Query 26126 CGTTTCATGGCGTCGAGCAGGATGTCCTGCACGGCGCGCTTCGTTTCGCGGCGCTCGACG 26185 || ||||| || || | | ||||||||||| ||||| | ||||| ||||| | | Sbjct 481 CGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCGCTCCATG 422 Query 26186 ACGTCCTCGTCGATCGTGTCGCGCGCGATGATCGGGTAGATGAAAACGGGGCGGCGGTGG 26245 || || |||| || ||| |||| || ||| |||||| || ||||| |||| Sbjct 421 ACCAGTTCATCGACGGTATCGGTAGCGACAATGTGGTGGATGAATACCGGGCGCGGGTGC 362 Query 26246 CCGGCCTGCAGCTGGCGCACGGGTCCGATCCGCTCGACGATCTGCAGGTATTCCTCGAGG 26305 || ||||| ||| || || | ||| ||||||| |||||| |||| | ||| || Sbjct 361 CCTGCCTGTGCCTGCCGGGTAGGGCTGATGCGCTCGATAATCTGCTGGTACTGCTCAAGT 302 Query 26306 TTCCACCAGTGGCCGAAGACCGCAAGGATGTTGCCGCCGTCCTGCAGGTTCAGGCCGTGG 26365 ||| ||||| ||| | | | | || | ||||||||||| |||||||| ||||| Sbjct 301 CCCCATCAGTGCGAGAAAAACACCACCAT--TACCGCCGTCCTGAAGGTTCAGCCCGTGC 244 Query 26366 CCGGCGCTGGCCGGGTGCGCGAACATCACCGGGATCTTGCCAGCGTTCCAGTCGCGGATC 26425 ||||||||||| ||||||||||||| | ||| ||| || ||||||||||||| ||| Sbjct 243 CCGGCGCTGGCAGGGTGCGCGAACAGTAGCGGTATCCGTCCGGCGTTCCAGTCGCTGATG 184 Query 26426 GTCTGCGGGTT 26436 |||||||| || Sbjct 183 GTCTGCGGATT 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135603741351774